Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023748.1-P | Field mustard | nucleus | 98.55 | 98.55 |
| CDX85071 | Canola | nucleus | 91.3 | 91.3 |
| CDX77537 | Canola | nucleus | 91.3 | 90.65 |
| AT3G23230.1 | Thale cress | nucleus | 89.86 | 89.21 |
| CDY08986 | Canola | nucleus | 96.38 | 62.74 |
| KRG92310 | Soybean | nucleus | 58.7 | 60.45 |
| KRH34484 | Soybean | nucleus | 60.87 | 59.57 |
| KRH12208 | Soybean | nucleus | 51.45 | 58.68 |
| KRH31710 | Soybean | nucleus | 57.25 | 57.66 |
| VIT_05s0049g00500.t01 | Wine grape | nucleus | 62.32 | 56.58 |
| KRH37227 | Soybean | nucleus | 50.0 | 56.56 |
| KRH37228 | Soybean | nucleus | 55.07 | 55.47 |
| CDY60663 | Canola | nucleus | 53.62 | 55.22 |
| CDY18225 | Canola | nucleus | 52.9 | 54.89 |
| CDY10057 | Canola | nucleus | 53.62 | 54.81 |
| CDY32941 | Canola | nucleus | 52.17 | 54.55 |
| CDY50478 | Canola | nucleus | 52.17 | 54.55 |
| CDY53187 | Canola | nucleus | 52.9 | 54.07 |
| KRH12207 | Soybean | nucleus | 50.72 | 53.03 |
| CDX77538 | Canola | nucleus | 47.83 | 52.8 |
| KRH37226 | Soybean | nucleus | 43.48 | 50.85 |
| Solyc09g089920.1.1 | Tomato | nucleus | 54.35 | 49.34 |
| CDX85070 | Canola | nucleus | 48.55 | 48.55 |
| PGSC0003DMT400097075 | Potato | nucleus | 50.72 | 47.95 |
| PGSC0003DMT400034984 | Potato | nucleus | 52.17 | 45.86 |
| Solyc03g005510.1.1 | Tomato | nucleus, plastid | 52.17 | 41.14 |
| CDY35515 | Canola | nucleus | 42.75 | 36.88 |
| CDY38052 | Canola | nucleus | 36.96 | 30.72 |
| CDX76569 | Canola | nucleus | 36.96 | 28.33 |
| CDY40779 | Canola | nucleus | 36.23 | 27.47 |
| CDY14036 | Canola | nucleus | 35.51 | 25.93 |
| CDY33523 | Canola | nucleus | 39.86 | 25.46 |
| CDX77750 | Canola | nucleus | 40.58 | 25.23 |
| CDY68787 | Canola | nucleus | 40.58 | 24.89 |
| CDY16811 | Canola | nucleus | 36.23 | 24.88 |
| CDY02130 | Canola | nucleus | 35.51 | 24.75 |
| CDY23053 | Canola | nucleus | 35.51 | 24.75 |
| CDX71695 | Canola | nucleus | 39.13 | 24.55 |
| CDX87222 | Canola | nucleus | 35.51 | 24.38 |
| CDY05842 | Canola | nucleus | 38.41 | 24.09 |
| CDY56473 | Canola | nucleus | 39.86 | 23.81 |
| CDY60497 | Canola | nucleus | 35.51 | 23.79 |
| CDY43434 | Canola | nucleus | 39.13 | 23.68 |
| CDX74692 | Canola | nucleus | 39.13 | 23.28 |
| CDY64666 | Canola | nucleus | 35.51 | 23.22 |
| CDY65883 | Canola | nucleus | 37.68 | 23.11 |
| CDY28965 | Canola | nucleus | 38.41 | 23.04 |
| CDY38401 | Canola | nucleus | 37.68 | 22.91 |
| CDY30489 | Canola | nucleus | 38.41 | 22.84 |
| CDY42869 | Canola | nucleus | 36.23 | 22.83 |
| CDY25978 | Canola | nucleus | 39.13 | 22.5 |
| CDY67760 | Canola | nucleus | 36.23 | 22.22 |
| CDY23459 | Canola | nucleus | 37.68 | 21.94 |
| CDY38399 | Canola | nucleus | 39.86 | 21.32 |
| CDY27923 | Canola | nucleus | 38.41 | 20.78 |
| CDY64966 | Canola | nucleus | 39.86 | 20.68 |
| CDX76570 | Canola | nucleus | 39.86 | 19.64 |
| CDY02129 | Canola | nucleus | 34.06 | 18.73 |
| CDY27922 | Canola | nucleus | 25.36 | 18.42 |
| CDY23052 | Canola | nucleus | 34.06 | 18.36 |
| CDY64687 | Canola | nucleus | 36.96 | 17.77 |
| CDY41042 | Canola | nucleus | 36.96 | 17.41 |
| CDY25977 | Canola | nucleus | 36.96 | 17.23 |
| CDX77755 | Canola | nucleus | 36.96 | 16.45 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HCS6 | UniProt:A0A078HCS6 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY35516 | ProteinID:CDY35516 | ProteinID:CDY35516.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00058554001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF68 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EED97F | SEG:seg | : | : |
Description
BnaA01g23960DBnaA01g23960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCS6]
Coordinates
chrLK032353:-:277728..278144
Molecular Weight (calculated)
16118.5 Da
IEP (calculated)
9.318
GRAVY (calculated)
-1.152
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGTHRRSKN QIQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEDAARAY DRAAYNLRGH LAILNFPNEY YSRMDDYSLR PPYSSSSSSS
101: GSTSTGVSRQ NQREVFEFEY LDDKILEELL DSEERNKR
101: GSTSTGVSRQ NQREVFEFEY LDDKILEELL DSEERNKR
001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
Arabidopsis Description
ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.