Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY65883 | Canola | nucleus | 89.87 | 90.67 |
CDY27923 | Canola | nucleus | 84.14 | 74.9 |
CDX76569 | Canola | nucleus | 58.59 | 73.89 |
AT4G17500.1 | Thale cress | nucleus | 83.7 | 70.9 |
CDY33523 | Canola | nucleus | 60.79 | 63.89 |
CDY68787 | Canola | nucleus | 63.0 | 63.56 |
CDX77750 | Canola | nucleus | 60.79 | 62.16 |
CDY43434 | Canola | nucleus | 61.23 | 60.96 |
CDY28965 | Canola | nucleus | 61.67 | 60.87 |
CDY25978 | Canola | nucleus | 63.0 | 59.58 |
KRH04192 | Soybean | nucleus | 56.83 | 51.39 |
KRH57484 | Soybean | nucleus | 56.83 | 50.59 |
KRH77323 | Soybean | nucleus | 57.71 | 47.81 |
KRH28165 | Soybean | nucleus | 56.39 | 47.58 |
VIT_02s0234g00130.t01 | Wine grape | nucleus | 56.83 | 45.74 |
GSMUA_Achr11P... | Banana | nucleus | 47.58 | 40.3 |
CDY32941 | Canola | nucleus | 23.35 | 40.15 |
CDX77537 | Canola | nucleus | 24.23 | 39.57 |
CDY50478 | Canola | nucleus | 22.91 | 39.39 |
CDX85071 | Canola | nucleus | 23.79 | 39.13 |
CDY10057 | Canola | nucleus | 22.91 | 38.52 |
CDY53187 | Canola | nucleus | 22.91 | 38.52 |
CDX77538 | Canola | nucleus | 21.15 | 38.4 |
CDY18225 | Canola | nucleus | 22.47 | 38.35 |
CDY60663 | Canola | nucleus | 22.47 | 38.06 |
CDY38052 | Canola | nucleus | 27.75 | 37.95 |
CDY35516 | Canola | nucleus | 22.91 | 37.68 |
TraesCS6B01G281000.1 | Wheat | nucleus | 44.93 | 37.64 |
TraesCS6A01G243300.1 | Wheat | nucleus | 44.93 | 37.5 |
TraesCS6D01G225500.1 | Wheat | nucleus | 44.93 | 37.36 |
Zm00001d002762_P001 | Maize | nucleus | 45.37 | 36.92 |
TraesCS2D01G414600.1 | Wheat | nucleus | 46.7 | 36.68 |
Zm00001d026191_P001 | Maize | nucleus | 43.61 | 36.67 |
TraesCS2B01G436300.1 | Wheat | nucleus | 46.7 | 36.55 |
GSMUA_Achr1P00490_001 | Banana | nucleus | 32.6 | 36.1 |
CDY30489 | Canola | nucleus | 36.56 | 35.78 |
CDX74692 | Canola | nucleus | 36.56 | 35.78 |
TraesCS2A01G417300.1 | Wheat | nucleus | 46.26 | 35.23 |
CDY56473 | Canola | nucleus | 35.68 | 35.06 |
OQU82076 | Sorghum | nucleus | 44.93 | 34.81 |
Zm00001d017462_P001 | Maize | nucleus | 43.17 | 34.75 |
Os02t0654700-01 | Rice | nucleus | 46.26 | 34.65 |
CDY23459 | Canola | nucleus | 36.12 | 34.6 |
CDX85070 | Canola | nucleus | 20.7 | 34.06 |
HORVU6Hr1G062380.3 | Barley | nucleus | 44.93 | 33.77 |
GSMUA_Achr5P21050_001 | Banana | nucleus | 48.46 | 33.23 |
EES05793 | Sorghum | nucleus | 45.37 | 33.12 |
Os04t0546800-01 | Rice | nucleus | 45.81 | 32.7 |
CDY40779 | Canola | nucleus | 25.55 | 31.87 |
CDY14036 | Canola | nucleus | 25.11 | 30.16 |
CDY60497 | Canola | nucleus | 26.87 | 29.61 |
CDY64666 | Canola | nucleus | 26.87 | 28.91 |
CDX87222 | Canola | nucleus | 25.11 | 28.36 |
CDY16811 | Canola | nucleus | 25.11 | 28.36 |
CDY02130 | Canola | nucleus | 24.23 | 27.78 |
CDY23053 | Canola | nucleus | 24.23 | 27.78 |
CDY42869 | Canola | nucleus | 25.11 | 26.03 |
CDX71695 | Canola | nucleus | 25.11 | 25.91 |
CDY05842 | Canola | nucleus | 25.11 | 25.91 |
CDY67760 | Canola | nucleus | 25.11 | 25.33 |
CDY08986 | Canola | nucleus | 22.91 | 24.53 |
CDY38399 | Canola | nucleus | 27.31 | 24.03 |
CDY64687 | Canola | nucleus | 29.96 | 23.69 |
CDY64966 | Canola | nucleus | 27.75 | 23.68 |
CDY25977 | Canola | nucleus | 30.4 | 23.31 |
CDY41042 | Canola | nucleus | 29.96 | 23.21 |
CDY23052 | Canola | nucleus | 25.55 | 22.66 |
CDY02129 | Canola | nucleus | 24.67 | 22.31 |
CDX77755 | Canola | nucleus | 30.4 | 22.26 |
CDX76570 | Canola | nucleus | 27.31 | 22.14 |
CDY35515 | Canola | nucleus | 15.42 | 21.88 |
CDY27922 | Canola | nucleus | 17.18 | 20.53 |
Protein Annotations
MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HL60 | UniProt:A0A078HL60 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
EnsemblPlants:CDY38401 | ProteinID:CDY38401 | ProteinID:CDY38401.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00065829001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 |
UniParc:UPI0004EF2AD6 | SEG:seg | : | : | : | : |
Description
BnaC01g10100DBnaC01g10100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HL60]
Coordinates
chrLK032423:+:180507..181367
Molecular Weight (calculated)
25167.7 Da
IEP (calculated)
9.532
GRAVY (calculated)
-0.559
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVESDYAFL ESIRQYLLEE SELRLAESMV AQSGTTAHSV KPVYGRNSSF SKLYPCFSES WGDLPLKEND SEDMLVYGIL NDAFHGGWEP SFPTVKTENF
101: LAVDSVPAKK TSSVQAPVKG KHYRGVRQRP WGKFAAEIRD PAKNGARVWL GTFETAEDAA LAYDKAAFRM RGSRALLNFP LRVNSGEPDP VRIKSKRGSS
201: SENRAPKRRR TAGQGTDVGL NVKCETV
101: LAVDSVPAKK TSSVQAPVKG KHYRGVRQRP WGKFAAEIRD PAKNGARVWL GTFETAEDAA LAYDKAAFRM RGSRALLNFP LRVNSGEPDP VRIKSKRGSS
201: SENRAPKRRR TAGQGTDVGL NVKCETV
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.