Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021047.1-P | Field mustard | nucleus | 40.07 | 62.43 |
| CDX76569 | Canola | nucleus | 39.36 | 61.67 |
| KRH04192 | Soybean | nucleus | 52.84 | 59.36 |
| KRH57484 | Soybean | nucleus | 52.84 | 58.43 |
| KRH77323 | Soybean | nucleus | 56.03 | 57.66 |
| CDY38401 | Canola | nucleus | 45.74 | 56.83 |
| CDY68787 | Canola | nucleus | 44.68 | 56.0 |
| CDY33523 | Canola | nucleus | 42.55 | 55.56 |
| CDY65883 | Canola | nucleus | 43.97 | 55.11 |
| CDX77750 | Canola | nucleus | 43.26 | 54.95 |
| Bra021048.1-P | Field mustard | nucleus | 49.29 | 54.72 |
| KRH28165 | Soybean | nucleus | 52.13 | 54.65 |
| Bra024954.1-P | Field mustard | nucleus | 42.2 | 54.59 |
| Bra022115.1-P | Field mustard | nucleus | 44.33 | 54.59 |
| AT5G47220.1 | Thale cress | nucleus | 46.81 | 54.32 |
| CDY27923 | Canola | nucleus | 48.94 | 54.12 |
| CDY43434 | Canola | nucleus | 43.62 | 53.95 |
| Bra040159.1-P | Field mustard | nucleus | 45.74 | 53.75 |
| AT4G17500.1 | Thale cress | nucleus | 51.06 | 53.73 |
| CDY28965 | Canola | nucleus | 43.62 | 53.48 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 44.33 | 52.08 |
| CDY25978 | Canola | nucleus | 44.33 | 52.08 |
| VIT_10s0003g00580.t01 | Wine grape | nucleus | 27.66 | 50.98 |
| Bra017495.1-P | Field mustard | nucleus | 43.62 | 50.2 |
| GSMUA_Achr11P... | Banana | nucleus | 47.52 | 50.0 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 36.17 | 49.28 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 35.11 | 48.29 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 35.11 | 48.29 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 35.82 | 47.2 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 46.1 | 44.98 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 43.26 | 44.85 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 46.1 | 44.83 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 43.26 | 44.69 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 42.91 | 44.65 |
| Zm00001d026191_P001 | Maize | nucleus | 41.49 | 43.33 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 45.74 | 43.29 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 31.21 | 42.93 |
| Zm00001d002762_P001 | Maize | nucleus | 42.2 | 42.65 |
| Zm00001d017462_P001 | Maize | nucleus | 42.2 | 42.2 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 48.58 | 41.39 |
| EES05793 | Sorghum | nucleus | 45.39 | 41.16 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 43.97 | 41.06 |
| OQU82076 | Sorghum | nucleus | 42.55 | 40.96 |
| VIT_05s0049g00490.t01 | Wine grape | nucleus | 18.79 | 40.77 |
| Os02t0654700-01 | Rice | nucleus | 43.62 | 40.59 |
| VIT_07s0005g03220.t01 | Wine grape | nucleus | 21.63 | 40.13 |
| VIT_07s0005g03190.t01 | Wine grape | nucleus | 21.28 | 38.46 |
| VIT_07s0005g03200.t01 | Wine grape | nucleus | 20.57 | 37.91 |
| Os04t0546800-01 | Rice | nucleus | 42.2 | 37.42 |
| VIT_07s0005g03210.t01 | Wine grape | nucleus | 19.15 | 37.24 |
| VIT_05s0049g00500.t01 | Wine grape | nucleus | 19.86 | 36.84 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 23.76 | 27.69 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 21.99 | 27.07 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 23.05 | 26.97 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 25.18 | 26.49 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 24.11 | 24.55 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 24.11 | 24.46 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 23.76 | 24.36 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 23.76 | 24.19 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 23.76 | 24.19 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 22.34 | 23.86 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 22.34 | 22.91 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 22.7 | 20.25 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 6.03 | 15.32 |
Protein Annotations
| EntrezGene:100254640 | wikigene:100254640 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:CCB50074 | ProteinID:CCB50074.1 | InterPro:DNA-bd_dom_sf | UniProt:F6HCX9 | EMBL:FN595528 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EntrezGene:LOC100254640 |
| wikigene:LOC100254640 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 |
| SMART:SM00380 | SUPFAM:SSF54171 | TIGR:TC57330 | UniParc:UPI0002109E10 | ArrayExpress:VIT_02s0234g00130 | EnsemblPlantsGene:VIT_02s0234g00130 |
| EnsemblPlants:VIT_02s0234g00130.t01 | unigene:Vvi.12438 | RefSeq:XP_002270581 | RefSeq:XP_002270581.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:177838..178960
Molecular Weight (calculated)
30317.4 Da
IEP (calculated)
7.501
GRAVY (calculated)
-0.426
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MCDYSSNPSS DFALLESVRR HLFDDSDSRR FDAPLYCRSN SFSSLFETGG ELPLKEDDSD DMVIYGFLRD AAIGGWTPTL APLFSETASY GFSAAPAVAV
101: KSEPEVFPAE VIGVPEKTVD PPAKLPAPAV VPAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAYRMRGSRA LLNFPLRVNS
201: GEPDPVRVTS KRSSPEPSSS STSSSSSDNS SPKRRKKVSS LAAPAVAPAT AQTGIEIGKS MEGSQAGYEV AQLTHGPQLL VR
101: KSEPEVFPAE VIGVPEKTVD PPAKLPAPAV VPAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAYRMRGSRA LLNFPLRVNS
201: GEPDPVRVTS KRSSPEPSSS STSSSSSDNS SPKRRKKVSS LAAPAVAPAT AQTGIEIGKS MEGSQAGYEV AQLTHGPQLL VR
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.