Factsheet for VIT_07s0005g03220.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g00490.t01	Wine grape	nucleus	48.03	56.15
VIT_05s0049g00500.t01	Wine grape	nucleus	53.95	53.95
KRH67370	Soybean	nucleus	53.95	53.59
KRH19552	Soybean	nucleus	53.29	52.94
VIT_07s0005g03200.t01	Wine grape	nucleus	52.63	52.29
KRH32179	Soybean	nucleus	53.95	51.9
PGSC0003DMT400026678	Potato	nucleus	52.63	50.96
Solyc09g066350.1.1	Tomato	nucleus	51.97	50.64
VIT_07s0005g03190.t01	Wine grape	nucleus	51.97	50.64
VIT_07s0005g03210.t01	Wine grape	nucleus	48.03	50.34
VIT_10s0003g00580.t01	Wine grape	nucleus	30.92	30.72
VIT_15s0021g01600.t01	Wine grape	nucleus	35.53	26.34
VIT_15s0021g01610.t01	Wine grape	nucleus	35.53	26.09
VIT_15s0021g01590.t01	Wine grape	nucleus	34.21	25.37
VIT_16s0013g00900.t01	Wine grape	nucleus	37.5	24.89
VIT_16s0013g01120.t01	Wine grape	nucleus, plastid	38.16	23.97
VIT_15s0021g01630.t01	Wine grape	nucleus	32.89	23.36
VIT_16s0013g01110.t01	Wine grape	nucleus	36.84	23.24
VIT_16s0013g01000.t01	Wine grape	nucleus	39.47	22.39
VIT_02s0234g00130.t01	Wine grape	nucleus	40.13	21.63
VIT_16s0013g01090.t01	Wine grape	nucleus	37.5	21.59
VIT_16s0013g00980.t01	Wine grape	nucleus	38.16	21.09
VIT_16s0013g01070.t01	Wine grape	nucleus	38.16	21.09
VIT_16s0013g00950.t01	Wine grape	nucleus	38.16	20.94
VIT_16s0013g00990.t01	Wine grape	nucleus	38.16	20.86
VIT_16s0013g00890.t01	Wine grape	nucleus	32.89	20.83
VIT_16s0013g01050.t01	Wine grape	nucleus	37.5	20.58
VIT_16s0013g01060.t01	Wine grape	nucleus	37.5	20.58
VIT_16s0013g00970.t01	Wine grape	nucleus	38.82	18.67
VIT_16s0013g01030.t01	Wine grape	cytosol	11.84	16.22

Protein Annotations

EntrezGene:100258333	wikigene:100258333	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:AM449749	InterPro:AP2/ERF-transcript_factor
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:CAN69802	ProteinID:CAN69802.1	ProteinID:CCB60104	ProteinID:CCB60104.1
InterPro:DNA-bd_dom_sf	UniProt:F6HZI9	EMBL:FN596502	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EntrezGene:LOC100258333	wikigene:LOC100258333	PFAM:PF00847
PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF60	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI00015CD1DE	ArrayExpress:VIT_07s0005g03220	EnsemblPlantsGene:VIT_07s0005g03220	EnsemblPlants:VIT_07s0005g03220.t01	RefSeq:XP_002264390
RefSeq:XP_002264390.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:6029202..6029826

Molecular Weight (calculated)

16890.1 Da

IEP (calculated)

7.668

GRAVY (calculated)

-1.015

Length

152 amino acids

Sequence
(BLAST)

001: MEGGGRRREG EDKAREVRYR GIRRRPWGKF AAEIRDPSRN GARLWLGTFD TAEEAARAYD RAAYAFRGHL AILNFPNEHQ YQNPGYGQTF SSSSSSSYSL
101: GSSSSSSAGR STGSGASISS RDQEGQVIEF EYLDNNLLEE LLEPQGDRRG NN

Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)

001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR

Arabidopsis Description

ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.