Factsheet for VIT_07s0005g03210.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g00490.t01	Wine grape	nucleus	53.1	59.23
HORVU5Hr1G017540.1	Barley	nucleus	50.34	57.94
VIT_07s0005g03200.t01	Wine grape	nucleus	60.69	57.52
VIT_07s0005g03190.t01	Wine grape	nucleus	61.38	57.05
TraesCS5D01G076200.1	Wheat	nucleus	47.59	57.02
TraesCS5B01G072200.1	Wheat	nucleus	47.59	57.02
TraesCS5A01G065400.1	Wheat	nucleus	47.59	57.02
Solyc03g005500.1.1	Tomato	nucleus	50.34	56.59
PGSC0003DMT400034871	Potato	nucleus	48.28	56.0
KXG35151	Sorghum	nucleus	49.66	55.81
PGSC0003DMT400044383	Potato	nucleus	53.1	55.4
Solyc09g089910.1.1	Tomato	nucleus	54.48	55.24
KRH34485	Soybean	nucleus	55.86	55.1
Zm00001d049903_P001	Maize	nucleus	46.9	54.84
GSMUA_Achr4P05510_001	Banana	nucleus	34.48	54.35
KRG92309	Soybean	nucleus	54.48	53.74
HORVU0Hr1G010370.3	Barley	nucleus	48.97	53.38
GSMUA_Achr4P12070_001	Banana	nucleus	46.21	52.76
KXG25362	Sorghum	nucleus	47.59	52.67
TraesCS4D01G001200.1	Wheat	nucleus	46.21	52.34
TraesCS4B01G001900.1	Wheat	nucleus	46.9	52.31
Zm00001d019744_P001	Maize	nucleus	48.97	52.21
Zm00001d005309_P001	Maize	nucleus	46.9	51.52
VIT_05s0049g00500.t01	Wine grape	nucleus	53.79	51.32
TraesCS4A01G001400.1	Wheat	nucleus	46.21	51.15
Os09t0571700-00	Rice	nucleus	46.21	51.15
HORVU4Hr1G000960.1	Barley	nucleus	45.52	49.25
VIT_07s0005g03220.t01	Wine grape	nucleus	50.34	48.03
KRH69131	Soybean	nucleus	54.48	47.02
TraesCS6B01G069200.1	Wheat	nucleus	40.0	45.67
VIT_10s0003g00580.t01	Wine grape	nucleus	33.79	32.03
VIT_15s0021g01630.t01	Wine grape	nucleus	37.93	25.7
VIT_16s0013g00900.t01	Wine grape	nucleus	38.62	24.45
VIT_15s0021g01600.t01	Wine grape	nucleus	34.48	24.39
VIT_15s0021g01610.t01	Wine grape	nucleus	34.48	24.15
VIT_16s0013g01110.t01	Wine grape	nucleus	39.31	23.65
VIT_15s0021g01590.t01	Wine grape	nucleus	33.1	23.41
VIT_16s0013g01120.t01	Wine grape	nucleus, plastid	38.62	23.14
VIT_16s0013g01090.t01	Wine grape	nucleus	41.38	22.73
VIT_16s0013g01000.t01	Wine grape	nucleus	40.0	21.64
VIT_16s0013g00980.t01	Wine grape	nucleus	40.69	21.45
VIT_16s0013g00950.t01	Wine grape	nucleus	40.69	21.3
VIT_16s0013g00990.t01	Wine grape	nucleus	40.69	21.22
VIT_16s0013g01070.t01	Wine grape	nucleus	40.0	21.09
VIT_16s0013g01050.t01	Wine grape	nucleus	39.31	20.58
VIT_16s0013g01060.t01	Wine grape	nucleus	39.31	20.58
VIT_16s0013g00890.t01	Wine grape	nucleus	32.41	19.58
VIT_02s0234g00130.t01	Wine grape	nucleus	37.24	19.15
VIT_16s0013g00970.t01	Wine grape	nucleus	40.0	18.35
VIT_16s0013g01030.t01	Wine grape	cytosol	11.72	15.32

Protein Annotations

EntrezGene:100263477	wikigene:100263477	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:AM449749	InterPro:AP2/ERF-transcript_factor
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:CAN69803	ProteinID:CAN69803.1	ProteinID:CCB60103	ProteinID:CCB60103.1
InterPro:DNA-bd_dom_sf	UniProt:F6HZI8	EMBL:FN596502	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EntrezGene:LOC100263477	wikigene:LOC100263477	PFAM:PF00847
PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF68	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0001983AB4	ArrayExpress:VIT_07s0005g03210	EnsemblPlantsGene:VIT_07s0005g03210	EnsemblPlants:VIT_07s0005g03210.t01	RefSeq:XP_002264347
RefSeq:XP_002264347.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:+:6027009..6027446

Molecular Weight (calculated)

16623.3 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.929

Length

145 amino acids

Sequence
(BLAST)

001: MEENSKGKVK EQHKSSVRYR GVRRRPWGKF AAEIRDSNRQ GVRMWLGTFT TAEEAARAYD QAAYAMRGGL AILNFPEDYG LSNASSRPHF SSSSSPLPLI
101: KFESPDNDTV TNQNQVFEFE YLDDKVLEDL LECEEKETTQ KRAKH

Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)

001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR

Arabidopsis Description

ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.