Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG35151 Sorghum nucleus 64.12 65.12
TraesCS4D01G001200.1 Wheat nucleus 63.36 64.84
Zm00001d019744_P001 Maize nucleus 66.41 63.97
TraesCS4B01G001900.1 Wheat nucleus 63.36 63.85
TraesCS4A01G001400.1 Wheat nucleus 63.36 63.36
Zm00001d005309_P001 Maize nucleus 62.6 62.12
HORVU4Hr1G000960.1 Barley nucleus 62.6 61.19
TraesCS6B01G069200.1 Wheat nucleus 54.96 56.69
GSMUA_Achr4P05510_001 Banana nucleus 38.93 55.43
GSMUA_Achr4P12070_001 Banana nucleus 53.44 55.12
VIT_05s0049g00490.t01 Wine grape nucleus 51.91 52.31
Os04t0257500-01 Rice nucleus 49.62 50.78
PGSC0003DMT400034871 Potato nucleus 47.33 49.6
Solyc03g005500.1.1 Tomato nucleus 48.09 48.84
Solyc09g089910.1.1 Tomato nucleus 51.91 47.55
PGSC0003DMT400044383 Potato nucleus 50.38 47.48
VIT_07s0005g03210.t01 Wine grape nucleus 51.15 46.21
Os03t0150200-00 Rice nucleus 49.62 46.1
KRH34485 Soybean nucleus 50.38 44.9
KRG92309 Soybean nucleus 49.62 44.22
VIT_07s0005g03200.t01 Wine grape nucleus 50.38 43.14
KRH69131 Soybean nucleus 53.44 41.67
VIT_07s0005g03190.t01 Wine grape nucleus 48.09 40.38
Os02t0654700-01 Rice nucleus 38.93 16.83
Os04t0547600-01 Rice nucleus 39.69 15.85
Os04t0546800-01 Rice nucleus 38.17 15.72
Os02t0655200-02 Rice nucleus 36.64 13.95
Protein Annotations
EntrezGene:107275382MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF-transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
ProteinID:BAD46612.1ProteinID:BAT09530.1InterPro:DNA-bd_dom_sfProteinID:EAZ45749.1GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005215GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006810
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR001471InterPro:IPR036955EnsemblPlantsGene:Os09g0571700EnsemblPlants:Os09t0571700-00
PFAM:PF00847PIRSF:PIRSF038123PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31190PANTHER:PTHR31190:SF71
UniProt:Q651A5SMART:SM00380SUPFAM:SSF54171UniParc:UPI000043A5CBRefSeq:XP_015611263.1SEG:seg
Description
ETHYLENE RESPONSE FACTOR 123Similar to Ethylene-responsive transcription factor ERF096. (Os09t0571700-00)
Coordinates
chr9:-:22821581..22821976
Molecular Weight (calculated)
14686.9 Da
IEP (calculated)
8.002
GRAVY (calculated)
-0.805
Length
131 amino acids
Sequence
(BLAST)
001: MDHHHQQQQQ EGELVAKYRG VRRRPWGKFA AEIRDSSRHG VRVWLGTFDT AEEAARAYDR SAYSMRGANA VLNFPADAHI YARQLHNNNA AAGSSSSSSA
101: AAAAARPPPI EFEYLDDHVL QEMLRDHTTN K
Best Arabidopsis Sequence Match ( AT5G43410.1 )
(BLAST)
001: MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE AARAYDQAAY SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K
Arabidopsis Description
ERF096Ethylene-responsive transcription factor ERF096 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.