Factsheet for Zm00001d049903_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25362	Sorghum	nucleus	90.32	85.5
TraesCS5D01G076200.1	Wheat	nucleus	72.58	74.38
TraesCS5B01G072200.1	Wheat	nucleus	72.58	74.38
TraesCS5A01G065400.1	Wheat	nucleus	72.58	74.38
HORVU5Hr1G017540.1	Barley	nucleus	72.58	71.43
HORVU0Hr1G010370.3	Barley	nucleus	71.77	66.92
Zm00001d019744_P001	Maize	nucleus	69.35	63.24
GSMUA_Achr4P05510_001	Banana	nucleus	42.74	57.61
Zm00001d005309_P001	Maize	nucleus	61.29	57.58
GSMUA_Achr4P12070_001	Banana	nucleus	54.84	53.54
VIT_05s0049g00490.t01	Wine grape	nucleus	54.84	52.31
PGSC0003DMT400034871	Potato	nucleus	51.61	51.2
Zm00001d014113_P001	Maize	nucleus	55.65	50.37
Solyc03g005500.1.1	Tomato	nucleus	51.61	49.61
Zm00001d027686_P001	Maize	nucleus	51.61	49.23
PGSC0003DMT400044383	Potato	nucleus	54.84	48.92
Solyc09g089910.1.1	Tomato	nucleus	55.65	48.25
VIT_07s0005g03210.t01	Wine grape	nucleus	54.84	46.9
KRH34485	Soybean	nucleus	53.23	44.9
KRG92309	Soybean	nucleus	53.23	44.9
KRH69131	Soybean	nucleus	56.45	41.67
VIT_07s0005g03200.t01	Wine grape	nucleus	50.0	40.52
VIT_07s0005g03190.t01	Wine grape	nucleus	50.0	39.74
Zm00001d027687_P001	Maize	plastid	20.16	33.78
Zm00001d026191_P001	Maize	nucleus	41.13	18.89
Zm00001d029940_P001	Maize	nucleus	36.29	18.67
Zm00001d002762_P001	Maize	nucleus	41.13	18.28
Zm00001d017462_P001	Maize	nucleus	38.71	17.02
Zm00001d002761_P001	Maize	nucleus	39.52	15.56
Zm00001d017466_P001	Maize	nucleus	41.13	15.5
Zm00001d051340_P001	Maize	nucleus	40.32	14.62
Zm00001d002760_P001	Maize	nucleus	39.52	13.76

Protein Annotations

EntrezGene:103655274	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQK51556.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7UT74	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF68	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00005B0D1A
EnsemblPlantsGene:Zm00001d049903	EnsemblPlants:Zm00001d049903_P001	EnsemblPlants:Zm00001d049903_T001	SEG:seg	:	:

Description

AP2-EREBP-transcription factor 78Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr4:+:51462096..51462470

Molecular Weight (calculated)

13232.4 Da

IEP (calculated)

9.086

GRAVY (calculated)

-0.819

Length

124 amino acids

Sequence
(BLAST)

001: MDDGGEPTKY RGVRRRPSGK FAAEIRDSSR QSVRMWLGTF DTAEEAARAY DRAAYAMRGQ IAVLNFPAEA RNYVRGGSSS SRQQQQGGGG GGGSGGGAGQ
101: QVIELECLDD QVLQEMLKGG DGKK

Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)

001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR

Arabidopsis Description

ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.