Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 87.32 | 87.32 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 86.83 | 85.99 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 68.78 | 65.89 |
| PGSC0003DMT400005836 | Potato | nucleus | 41.95 | 43.22 |
| Solyc08g007230.1.1 | Tomato | nucleus | 40.49 | 41.71 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 39.51 | 39.51 |
| VIT_10s0003g00580.t01 | Wine grape | nucleus | 29.27 | 39.22 |
| VIT_05s0049g00490.t01 | Wine grape | nucleus | 24.39 | 38.46 |
| PGSC0003DMT400067535 | Potato | nucleus | 43.41 | 38.03 |
| Solyc08g078180.1.1 | Tomato | nucleus | 43.41 | 38.03 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 44.39 | 37.92 |
| PGSC0003DMT400067534 | Potato | nucleus | 42.93 | 37.77 |
| Solyc08g078170.1.1 | Tomato | nucleus | 42.93 | 37.13 |
| VIT_07s0005g03220.t01 | Wine grape | nucleus | 26.34 | 35.53 |
| VIT_07s0005g03190.t01 | Wine grape | nucleus | 26.83 | 35.26 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 48.29 | 35.11 |
| GSMUA_Achr11P... | Banana | nucleus | 45.85 | 35.07 |
| VIT_05s0049g00500.t01 | Wine grape | nucleus | 25.85 | 34.87 |
| VIT_07s0005g03210.t01 | Wine grape | nucleus | 24.39 | 34.48 |
| VIT_07s0005g03200.t01 | Wine grape | nucleus | 24.88 | 33.33 |
| Zm00001d026191_P001 | Maize | nucleus | 42.44 | 32.22 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 40.98 | 31.0 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 40.98 | 30.88 |
| Zm00001d002762_P001 | Maize | nucleus | 41.95 | 30.82 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 43.41 | 30.8 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 40.49 | 30.4 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 42.93 | 30.34 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 43.41 | 29.87 |
| Zm00001d017462_P001 | Maize | nucleus | 40.98 | 29.79 |
| OQU82076 | Sorghum | nucleus | 42.44 | 29.69 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 42.44 | 28.81 |
| Os02t0654700-01 | Rice | nucleus | 40.49 | 27.39 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 31.71 | 26.86 |
| Os04t0546800-01 | Rice | nucleus | 41.46 | 26.73 |
| EES05793 | Sorghum | nucleus | 40.49 | 26.69 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 42.93 | 26.59 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 28.78 | 24.48 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 27.32 | 24.45 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 30.24 | 23.13 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 29.76 | 22.18 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 29.76 | 22.18 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 28.29 | 21.97 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 29.27 | 21.66 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 29.27 | 21.66 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 29.27 | 21.66 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 29.27 | 21.58 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 27.8 | 18.04 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 7.8 | 14.41 |
Protein Annotations
| EntrezGene:100253112 | wikigene:100253112 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:CBI16660 | ProteinID:CBI16660.3 | UniProt:D7SLY2 | InterPro:DNA-bd_dom_sf | EMBL:FN594952 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EntrezGene:LOC100253112 |
| wikigene:LOC100253112 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0001984EEC | ArrayExpress:VIT_15s0021g01600 | EnsemblPlantsGene:VIT_15s0021g01600 | EnsemblPlants:VIT_15s0021g01600.t01 |
| RefSeq:XP_002271494 | RefSeq:XP_002271494.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr15:-:12230396..12231049
Molecular Weight (calculated)
22436.1 Da
IEP (calculated)
6.817
GRAVY (calculated)
-0.513
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGHTTFDSD VAFLESVRSY LLEDSVLPHP FSANAPAYSA TTPTFTENRE NQPVLDAAAA SGVVGEAKAE PQEAAGPEKL RRYRGVRRRP WGKYAAEIRD
101: PAKNGARVWL GTYETAEDAA LAYDRAAFRI RGSRAILNFP LRIGSGDPEP VRITTKRRSP QPSLSAAAAA ALKRTKGDVE STAEMEAATE NVEDVFQLHQ
201: LWVNS
101: PAKNGARVWL GTYETAEDAA LAYDRAAFRI RGSRAILNFP LRIGSGDPEP VRITTKRRSP QPSLSAAAAA ALKRTKGDVE STAEMEAATE NVEDVFQLHQ
201: LWVNS
001: MSSSDSVNNG VNSRMYFRNP SFSNVILNDN WSDLPLSVDD SQDMAIYNTL RDAVSSGWTP SVPPVTSPAE ENKPPATKAS GSHAPRQKGM QYRGVRRRPW
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI
Arabidopsis Description
ERF13Ethylene-responsive transcription factor 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.