Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024954.1-P | Field mustard | nucleus | 97.22 | 96.33 |
| CDX77750 | Canola | nucleus | 92.59 | 90.09 |
| CDY25978 | Canola | nucleus | 84.26 | 75.83 |
| CDY68787 | Canola | nucleus | 77.78 | 74.67 |
| CDY43434 | Canola | nucleus | 77.78 | 73.68 |
| CDY28965 | Canola | nucleus | 77.31 | 72.61 |
| AT5G47220.1 | Thale cress | nucleus | 75.46 | 67.08 |
| CDY38401 | Canola | nucleus | 63.89 | 60.79 |
| CDX76569 | Canola | nucleus | 49.54 | 59.44 |
| CDY65883 | Canola | nucleus | 60.65 | 58.22 |
| CDY27923 | Canola | nucleus | 67.13 | 56.86 |
| KRH04192 | Soybean | nucleus | 55.09 | 47.41 |
| KRH57484 | Soybean | nucleus | 55.09 | 46.67 |
| KRH28165 | Soybean | nucleus | 56.02 | 44.98 |
| KRH77323 | Soybean | nucleus | 56.48 | 44.53 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 55.56 | 42.55 |
| CDX77537 | Canola | nucleus | 26.85 | 41.73 |
| CDX85071 | Canola | nucleus | 26.39 | 41.3 |
| CDY50478 | Canola | nucleus | 25.0 | 40.91 |
| CDY32941 | Canola | nucleus | 24.54 | 40.15 |
| CDX77538 | Canola | nucleus | 23.15 | 40.0 |
| CDY35516 | Canola | nucleus | 25.46 | 39.86 |
| CDY18225 | Canola | nucleus | 24.54 | 39.85 |
| CDY60663 | Canola | nucleus | 24.54 | 39.55 |
| CDY53187 | Canola | nucleus | 24.54 | 39.26 |
| CDY10057 | Canola | nucleus | 24.54 | 39.26 |
| CDY38052 | Canola | nucleus | 29.17 | 37.95 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 34.72 | 36.59 |
| GSMUA_Achr11P... | Banana | nucleus | 44.44 | 35.82 |
| Zm00001d026191_P001 | Maize | nucleus | 43.52 | 34.81 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 43.52 | 34.56 |
| Zm00001d002762_P001 | Maize | nucleus | 44.44 | 34.41 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 43.06 | 34.32 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 43.06 | 34.07 |
| CDX85070 | Canola | nucleus | 21.76 | 34.06 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 45.37 | 33.91 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 45.37 | 33.79 |
| CDY30489 | Canola | nucleus | 35.65 | 33.19 |
| CDX74692 | Canola | nucleus | 35.65 | 33.19 |
| CDY56473 | Canola | nucleus | 35.19 | 32.9 |
| Os02t0654700-01 | Rice | nucleus | 45.83 | 32.67 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 44.91 | 32.55 |
| OQU82076 | Sorghum | nucleus | 43.98 | 32.42 |
| Zm00001d017462_P001 | Maize | nucleus | 42.13 | 32.27 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 43.98 | 31.46 |
| CDY23459 | Canola | nucleus | 34.26 | 31.22 |
| EES05793 | Sorghum | nucleus | 44.44 | 30.87 |
| CDY40779 | Canola | nucleus | 25.46 | 30.22 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 45.37 | 29.61 |
| Os04t0546800-01 | Rice | nucleus | 43.52 | 29.56 |
| CDY60497 | Canola | nucleus | 27.31 | 28.64 |
| CDY14036 | Canola | nucleus | 25.0 | 28.57 |
| CDY64666 | Canola | nucleus | 27.31 | 27.96 |
| CDX71695 | Canola | nucleus | 28.24 | 27.73 |
| CDY05842 | Canola | nucleus | 28.24 | 27.73 |
| CDY16811 | Canola | nucleus | 25.46 | 27.36 |
| CDY23053 | Canola | nucleus | 25.0 | 27.27 |
| CDY02130 | Canola | nucleus | 24.54 | 26.77 |
| CDY42869 | Canola | nucleus | 26.39 | 26.03 |
| CDY08986 | Canola | nucleus | 25.46 | 25.94 |
| CDX87222 | Canola | nucleus | 24.07 | 25.87 |
| CDY67760 | Canola | nucleus | 26.39 | 25.33 |
| CDY38399 | Canola | nucleus | 29.63 | 24.81 |
| CDY35515 | Canola | nucleus | 18.06 | 24.38 |
| CDY64687 | Canola | nucleus | 31.94 | 24.04 |
| CDY64966 | Canola | nucleus | 29.17 | 23.68 |
| CDY25977 | Canola | nucleus | 32.41 | 23.65 |
| CDY41042 | Canola | nucleus | 31.48 | 23.21 |
| CDX76570 | Canola | nucleus | 29.63 | 22.86 |
| CDX77755 | Canola | nucleus | 32.41 | 22.58 |
| CDY02129 | Canola | nucleus | 25.46 | 21.91 |
| CDY23052 | Canola | nucleus | 25.46 | 21.48 |
| CDY27922 | Canola | nucleus | 17.59 | 20.0 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078H9M8 | UniProt:A0A078H9M8 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY33523 | ProteinID:CDY33523 | ProteinID:CDY33523.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00054775001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE4AA0 | SEG:seg | : | : | : | : |
Description
BnaA06g35500DBnaA06g35500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9M8]
Coordinates
chrLK032315:-:427063..427834
Molecular Weight (calculated)
24028.0 Da
IEP (calculated)
8.182
GRAVY (calculated)
-0.710
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGEGEITAA AESDYALLES IRRHLLGGDN ELRFNESIPS SCFTQSWGDL PLKENDSEDM LVYSVLNDAF ETPSPSSDLS CLSDFNYFPA VKTESLDNFA
101: AVVEKPKAVA APPGKGKHYR GVRQRPWGKF AAEIRDPAKK GAREWLGTFE TAEDAALAYD RAAFRMRGSR ALLNFPLRVN SGEPDPVRIK SKRSYKSSSS
201: SENGKPKQRR RTENVP
101: AVVEKPKAVA APPGKGKHYR GVRQRPWGKF AAEIRDPAKK GAREWLGTFE TAEDAALAYD RAAFRMRGSR ALLNFPLRVN SGEPDPVRIK SKRSYKSSSS
201: SENGKPKQRR RTENVP
001: MYGQCNIESD YALLESITRH LLGGGGENEL RLNESTPSSC FTESWGGLPL KENDSEDMLV YGLLKDAFHF DTSSSDLSCL FDFPAVKVEP TENFTAMEEK
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
Arabidopsis Description
ERF2ERF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UCP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.