Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | CDX79801 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDX83459 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDY17911 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDY44256 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDY13551 | AT5G44420.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029319.1-P | Field mustard | nucleus | 99.54 | 97.76 |
| CDY67760 | Canola | nucleus | 99.54 | 96.89 |
| AT5G61600.1 | Thale cress | nucleus | 78.08 | 70.95 |
| CDY02129 | Canola | nucleus | 79.91 | 69.72 |
| CDY23052 | Canola | nucleus | 81.28 | 69.53 |
| CDX77538 | Canola | nucleus | 22.83 | 40.0 |
| CDY40779 | Canola | nucleus | 32.42 | 39.01 |
| CDY32941 | Canola | nucleus | 23.29 | 38.64 |
| CDY50478 | Canola | nucleus | 23.29 | 38.64 |
| CDY14036 | Canola | nucleus | 32.88 | 38.1 |
| CDX85071 | Canola | nucleus | 23.74 | 37.68 |
| CDX77537 | Canola | nucleus | 23.74 | 37.41 |
| CDY18225 | Canola | nucleus | 22.37 | 36.84 |
| CDY60663 | Canola | nucleus | 22.37 | 36.57 |
| CDY35516 | Canola | nucleus | 22.83 | 36.23 |
| CDY53187 | Canola | nucleus | 21.92 | 35.56 |
| CDY10057 | Canola | nucleus | 21.92 | 35.56 |
| CDX85070 | Canola | nucleus | 22.37 | 35.51 |
| CDY60497 | Canola | nucleus | 33.33 | 35.44 |
| CDY64666 | Canola | nucleus | 33.33 | 34.6 |
| CDY38052 | Canola | nucleus | 25.57 | 33.73 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 30.14 | 33.67 |
| CDY16811 | Canola | nucleus | 29.68 | 32.34 |
| CDY02130 | Canola | nucleus | 29.22 | 32.32 |
| CDY23053 | Canola | nucleus | 28.77 | 31.82 |
| CDX87222 | Canola | nucleus | 28.77 | 31.34 |
| CDX71695 | Canola | nucleus | 30.14 | 30.0 |
| CDY05842 | Canola | nucleus | 30.14 | 30.0 |
| GSMUA_Achr11P... | Banana | nucleus | 24.66 | 28.42 |
| Zm00001d029940_P001 | Maize | nucleus | 31.05 | 28.22 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 30.59 | 27.69 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 29.68 | 27.66 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 29.68 | 27.54 |
| CDY35515 | Canola | nucleus | 19.63 | 26.88 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 28.77 | 26.69 |
| CDX76569 | Canola | nucleus | 21.92 | 26.67 |
| CDY33523 | Canola | nucleus | 26.03 | 26.39 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 30.14 | 25.78 |
| CDX77750 | Canola | nucleus | 26.03 | 25.68 |
| CDY38401 | Canola | nucleus | 26.03 | 25.11 |
| OQU92128 | Sorghum | nucleus | 31.51 | 24.91 |
| CDY65883 | Canola | nucleus | 25.57 | 24.89 |
| CDY08986 | Canola | nucleus | 23.74 | 24.53 |
| CDY68787 | Canola | nucleus | 25.11 | 24.44 |
| CDY28965 | Canola | nucleus | 25.11 | 23.91 |
| CDY38399 | Canola | nucleus | 27.85 | 23.64 |
| CDY41042 | Canola | nucleus | 31.05 | 23.21 |
| CDY64687 | Canola | nucleus | 30.14 | 23.0 |
| CDY43434 | Canola | nucleus | 23.74 | 22.81 |
| CDY25977 | Canola | nucleus | 30.59 | 22.64 |
| CDY64966 | Canola | nucleus | 26.94 | 22.18 |
| CDX76570 | Canola | nucleus | 28.31 | 22.14 |
| CDY25978 | Canola | nucleus | 24.2 | 22.08 |
| CDY56473 | Canola | nucleus | 23.29 | 22.08 |
| CDY30489 | Canola | nucleus | 23.29 | 21.98 |
| CDX74692 | Canola | nucleus | 23.29 | 21.98 |
| CDY27923 | Canola | nucleus | 25.57 | 21.96 |
| Zm00001d002761_P001 | Maize | nucleus | 31.05 | 21.59 |
| CDY23459 | Canola | nucleus | 23.29 | 21.52 |
| CDX77755 | Canola | nucleus | 29.68 | 20.97 |
| CDY27922 | Canola | nucleus | 17.81 | 20.53 |
| EES11214 | Sorghum | nucleus | 26.48 | 20.35 |
| EES11211 | Sorghum | nucleus | 29.68 | 20.12 |
| Os04t0547600-01 | Rice | nucleus | 30.14 | 20.12 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 30.59 | 19.94 |
| KXG26835 | Sorghum | nucleus | 29.68 | 19.46 |
| Zm00001d017466_P001 | Maize | nucleus | 29.22 | 19.45 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 30.14 | 19.35 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 30.14 | 19.24 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 26.48 | 19.14 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 30.14 | 19.13 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 29.22 | 19.1 |
| Zm00001d002760_P001 | Maize | nucleus | 31.05 | 19.1 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 29.22 | 19.05 |
| KXG26836 | Sorghum | nucleus | 30.59 | 18.98 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 26.94 | 18.61 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 26.94 | 18.55 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 26.94 | 18.44 |
| OQU76347 | Sorghum | nucleus | 24.66 | 18.24 |
| KXG31094 | Sorghum | nucleus | 28.31 | 18.13 |
| Zm00001d051340_P001 | Maize | nucleus | 28.31 | 18.13 |
| Os02t0655200-02 | Rice | nucleus | 27.4 | 17.44 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 19.18 | 11.73 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HZV5 | UniProt:A0A078HZV5 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY42869 | ProteinID:CDY42869 | ProteinID:CDY42869.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00075566001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE7D33 | SEG:seg | : | : | : | : |
Description
BnaAnng06940DBnaAnng06940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZV5]
Coordinates
chrLK032536:+:202685..203437
Molecular Weight (calculated)
24342.8 Da
IEP (calculated)
9.851
GRAVY (calculated)
-0.635
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKQEALAI EFISQHLLTD FASQDHHLHS ETTPRTIGNH NPKPNSTLNR RKPPLPNLSV PVSSTMKKPE EEEKRHYRGV RRRPWGKYAA EIRDPNKKGS
101: RLWLGTYDTA VEAARAYDLA AFELRGRKAI LNFPLDVRAT SESCFVGLGK RKRLKSFVAE EETVPVRVKA EEKESDTTVA EVEAVPLTPS SWKGVWDVGA
201: GDGIFSVPPL TPTSPSSAT
101: RLWLGTYDTA VEAARAYDLA AFELRGRKAI LNFPLDVRAT SESCFVGLGK RKRLKSFVAE EETVPVRVKA EEKESDTTVA EVEAVPLTPS SWKGVWDVGA
201: GDGIFSVPPL TPTSPSSAT
001: MATKQEALAI DFISQHLLTD FVSMETDHPS LFTNQLHNFH SETGPRTITN QSPKPNSTLN QRKPPLPNLS VSRTVSTKTE KEEEERHYRG VRRRPWGKYA
101: AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE
201: PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T
101: AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE
201: PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T
Arabidopsis Description
ERF104Ethylene-responsive transcription factor ERF104 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.