Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER89222 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | EER89222 | AT2G43790.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11211 | Sorghum | nucleus | 82.04 | 84.83 |
| Zm00001d002761_P001 | Maize | nucleus | 77.25 | 81.9 |
| KXG26836 | Sorghum | nucleus | 63.77 | 60.34 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 60.48 | 59.24 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 60.18 | 58.6 |
| Os04t0547600-01 | Rice | nucleus | 57.48 | 58.54 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 60.18 | 58.26 |
| EES11214 | Sorghum | nucleus | 49.7 | 58.25 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 58.38 | 58.21 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 58.38 | 58.04 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 58.08 | 57.74 |
| KXG31094 | Sorghum | nucleus | 50.6 | 49.42 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 49.1 | 45.81 |
| GSMUA_Achr11P... | Banana | nucleus | 26.05 | 45.79 |
| OQU76347 | Sorghum | nucleus | 38.32 | 43.24 |
| KXG35151 | Sorghum | nucleus | 15.87 | 41.09 |
| KXG38440 | Sorghum | nucleus | 16.77 | 40.58 |
| KXG25362 | Sorghum | nucleus | 15.87 | 40.46 |
| KXG40163 | Sorghum | nucleus | 15.87 | 39.85 |
| Bra035732.1-P | Field mustard | nucleus | 25.15 | 38.71 |
| CDX71695 | Canola | nucleus | 25.45 | 38.64 |
| OQU92128 | Sorghum | nucleus | 32.04 | 38.63 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 27.84 | 38.59 |
| CDY05842 | Canola | nucleus | 25.15 | 38.18 |
| AT5G51190.1 | Thale cress | nucleus | 24.85 | 37.56 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 25.75 | 37.55 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 26.35 | 36.36 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 29.34 | 35.25 |
| KRH28164 | Soybean | nucleus | 29.04 | 35.14 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 27.84 | 34.7 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 28.44 | 34.55 |
| CDY38399 | Canola | nucleus | 26.65 | 34.5 |
| KRH77324 | Soybean | nucleus | 28.14 | 34.18 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 27.84 | 33.57 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 27.84 | 33.57 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 27.54 | 33.45 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 26.35 | 33.33 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 27.54 | 33.21 |
| KRH04191 | Soybean | nucleus | 27.25 | 33.09 |
| KRH57483 | Soybean | nucleus | 27.25 | 32.73 |
| Bra040158.1-P | Field mustard | nucleus | 26.05 | 32.71 |
| CDY64966 | Canola | nucleus | 26.05 | 32.71 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 10.78 | 32.43 |
| CDY40779 | Canola | nucleus | 17.37 | 31.87 |
| Bra028690.1-P | Field mustard | nucleus | 17.37 | 31.87 |
| CDY64687 | Canola | nucleus | 27.25 | 31.71 |
| KRH34607 | Soybean | nucleus | 18.86 | 31.34 |
| KRG92180 | Soybean | nucleus | 18.56 | 31.16 |
| Solyc03g093540.1.1 | Tomato | nucleus | 21.26 | 31.14 |
| Solyc03g093550.1.1 | Tomato | nucleus | 22.46 | 31.12 |
| PGSC0003DMT400090475 | Potato | nucleus | 22.75 | 31.02 |
| Bra024953.1-P | Field mustard | nucleus | 27.25 | 30.85 |
| PGSC0003DMT400027937 | Potato | nucleus | 23.35 | 30.83 |
| PGSC0003DMT400086995 | Potato | nucleus | 22.46 | 30.61 |
| CDY27922 | Canola | nucleus | 17.37 | 30.53 |
| CDY41042 | Canola | nucleus | 26.65 | 30.38 |
| CDX76570 | Canola | nucleus | 25.45 | 30.36 |
| AT5G47230.1 | Thale cress | nucleus | 27.25 | 30.33 |
| Solyc03g093560.1.1 | Tomato | nucleus | 22.16 | 30.33 |
| CDY25977 | Canola | nucleus | 26.65 | 30.07 |
| Bra017493.1-P | Field mustard | nucleus | 26.35 | 29.93 |
| AT4G17490.1 | Thale cress | nucleus | 25.15 | 29.79 |
| KRG90129 | Soybean | nucleus | 23.65 | 29.7 |
| CDY42869 | Canola | nucleus | 19.46 | 29.68 |
| CDY14036 | Canola | nucleus | 16.77 | 29.63 |
| Bra029319.1-P | Field mustard | nucleus | 19.46 | 29.15 |
| CDY60497 | Canola | nucleus | 17.96 | 29.13 |
| CDY64666 | Canola | nucleus | 18.26 | 28.91 |
| Bra009250.1-P | Field mustard | nucleus | 18.26 | 28.91 |
| CDY67760 | Canola | nucleus | 19.46 | 28.89 |
| Solyc05g052030.1.1 | Tomato | nucleus | 17.37 | 28.86 |
| Bra021049.1-P | Field mustard | nucleus | 24.25 | 28.83 |
| PGSC0003DMT400067472 | Potato | nucleus | 23.95 | 28.78 |
| PGSC0003DMT400041328 | Potato | nucleus | 17.66 | 28.64 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 17.66 | 28.5 |
| CDX77755 | Canola | nucleus | 26.35 | 28.39 |
| PGSC0003DMT400041327 | Potato | nucleus | 25.15 | 28.38 |
| Solyc08g078190.1.1 | Tomato | nucleus | 27.25 | 28.26 |
| KRH33374 | Soybean | nucleus | 23.65 | 28.11 |
| AT5G61590.1 | Thale cress | nucleus | 16.77 | 27.86 |
| CDY16811 | Canola | nucleus | 16.77 | 27.86 |
| KRG90130 | Soybean | nucleus | 17.37 | 27.75 |
| CDX87222 | Canola | nucleus | 16.47 | 27.36 |
| Bra035919.1-P | Field mustard | nucleus | 16.47 | 27.09 |
| AT5G61600.1 | Thale cress | nucleus | 19.46 | 26.97 |
| CDY23053 | Canola | nucleus | 15.87 | 26.77 |
| CDY02130 | Canola | nucleus | 15.87 | 26.77 |
| Bra012939.1-P | Field mustard | nucleus | 15.87 | 26.77 |
| KRH33376 | Soybean | nucleus | 17.07 | 25.91 |
| CDY23052 | Canola | nucleus | 19.46 | 25.39 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 23.95 | 25.32 |
| OQU82076 | Sorghum | nucleus | 22.16 | 25.26 |
| CDY02129 | Canola | nucleus | 18.86 | 25.1 |
| Bra012938.1-P | Field mustard | nucleus | 19.16 | 24.81 |
| EES05793 | Sorghum | nucleus | 22.16 | 23.79 |
| Solyc05g052040.1.1 | Tomato | nucleus | 25.45 | 23.29 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A1B6PMF0 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| EnsemblPlants:KXG26835 | ProteinID:KXG26835 | ProteinID:KXG26835.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF54 | SMART:SM00380 | EnsemblPlantsGene:SORBI_3006G168000 | SUPFAM:SSF54171 | UniParc:UPI00081ABE93 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:52528163..52529167
Molecular Weight (calculated)
35592.9 Da
IEP (calculated)
4.656
GRAVY (calculated)
-0.276
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMDFTGDAD GFALDFIRDL MLGGDGSVPV DSPVVVVSDD VTFPVLPPQP EFQPVSLLPQ QQQHQGYIDI DLTTAECVGA APTAAAVVGE AAAFRAHEPA
101: PPVMIKFGSE PSSPTAMRQP PLTISVPPSS YAWVSSAGMP AAAVEEDFRK YRGVRQRPWG KYAAEIRDPK RRGSRVWLGT YDTPVEAARA YDRAAFRMRG
201: AKAILNFPNE VGTRGADLWA APATASKRRR QQMEGGQDDP EVEVVAVVNK VVKIEAPPPP STQVSSTSPS PVSTPETTAS STVTSATTET GGGAEWLPVT
301: PSSGSSEQYW EALLRDLPPL SPHPALGFPL LSVN
101: PPVMIKFGSE PSSPTAMRQP PLTISVPPSS YAWVSSAGMP AAAVEEDFRK YRGVRQRPWG KYAAEIRDPK RRGSRVWLGT YDTPVEAARA YDRAAFRMRG
201: AKAILNFPNE VGTRGADLWA APATASKRRR QQMEGGQDDP EVEVVAVVNK VVKIEAPPPP STQVSSTSPS PVSTPETTAS STVTSATTET GGGAEWLPVT
301: PSSGSSEQYW EALLRDLPPL SPHPALGFPL LSVN
001: MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
Arabidopsis Description
ERF5ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.