Factsheet for Bra028690.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40779	Canola	nucleus	100.0	100.0
Bra009250.1-P	Field mustard	nucleus	86.81	74.88
AT5G07580.1	Thale cress	golgi, nucleus, plastid	81.32	71.5
Bra012939.1-P	Field mustard	nucleus	66.48	61.11
Bra035919.1-P	Field mustard	nucleus	67.03	60.1
Solyc05g052030.1.1	Tomato	nucleus	42.86	38.81
PGSC0003DMT400041328	Potato	nucleus	42.86	37.86
KRH34607	Soybean	nucleus	41.76	37.81
KRG92180	Soybean	nucleus	41.21	37.69
Bra023748.1-P	Field mustard	nucleus	28.02	36.96
Bra014925.1-P	Field mustard	nucleus	28.02	36.69
KRG90130	Soybean	nucleus	41.76	36.36
Bra027493.1-P	Field mustard	nucleus	26.37	36.36
Bra015310.1-P	Field mustard	nucleus	26.37	35.82
Bra032512.1-P	Field mustard	nucleus	26.92	35.51
Bra014924.1-P	Field mustard	nucleus	26.37	34.78
KRH33376	Soybean	nucleus	40.11	33.18
Bra032665.1-P	Field mustard	nucleus	28.57	32.7
GSMUA_Achr1P00480_001	Banana	nucleus	35.16	32.65
Bra029319.1-P	Field mustard	nucleus	39.01	31.84
Bra035732.1-P	Field mustard	nucleus	34.62	29.03
Bra012938.1-P	Field mustard	nucleus	39.56	27.91
Bra021047.1-P	Field mustard	nucleus	27.47	27.62
GSMUA_Achr11P...	Banana	nucleus	26.92	25.79
GSMUA_Achr2P10490_001	Banana	nucleus	32.42	25.11
GSMUA_Achr7P06910_001	Banana	nucleus	32.42	25.0
Zm00001d029940_P001	Maize	nucleus	32.42	24.48
Bra024954.1-P	Field mustard	nucleus	29.12	24.31
TraesCS1A01G218100.1	Wheat	nucleus	31.32	24.15
HORVU1Hr1G055710.1	Barley	nucleus	31.87	23.97
Bra040159.1-P	Field mustard	nucleus	31.32	23.75
Bra022115.1-P	Field mustard	nucleus	29.67	23.58
TraesCS1B01G231500.1	Wheat	nucleus	32.42	23.05
Bra017495.1-P	Field mustard	nucleus	30.77	22.86
Bra021048.1-P	Field mustard	nucleus	31.87	22.83
Bra004873.1-P	Field mustard	nucleus	28.02	21.98
Bra040158.1-P	Field mustard	nucleus	31.87	21.8
OQU92128	Sorghum	nucleus	32.97	21.66
Bra017493.1-P	Field mustard	nucleus	34.07	21.09
Bra024953.1-P	Field mustard	nucleus	34.07	21.02
Bra037630.1-P	Field mustard	nucleus	26.92	20.85
Bra021049.1-P	Field mustard	nucleus	31.32	20.28
HORVU6Hr1G062430.1	Barley	nucleus	30.77	18.48
Zm00001d002761_P001	Maize	nucleus	31.87	18.41
Bra023749.1-P	Field mustard	nucleus	12.09	18.33
TraesCS2B01G436100.1	Wheat	nucleus	34.07	18.18
TraesCS2A01G417200.1	Wheat	nucleus	33.52	18.15
EES11211	Sorghum	nucleus	31.87	17.96
Zm00001d017466_P001	Maize	nucleus	32.42	17.93
TraesCS6B01G280800.1	Wheat	nucleus	31.32	17.92
TraesCS2D01G414300.1	Wheat	nucleus	33.52	17.78
Os04t0547600-01	Rice	nucleus	31.87	17.68
TraesCS2A01G417100.1	Wheat	nucleus	33.52	17.68
TraesCS6D01G225700.1	Wheat	nucleus	30.77	17.67
TraesCS2B01G436200.1	Wheat	nucleus	32.42	17.61
TraesCS2D01G414500.1	Wheat	nucleus	32.42	17.56
TraesCS6A01G243500.1	Wheat	nucleus	30.77	17.5
KXG26835	Sorghum	nucleus	31.87	17.37
Zm00001d051340_P001	Maize	nucleus	32.42	17.25
KXG31094	Sorghum	nucleus	32.42	17.25
Zm00001d002760_P001	Maize	nucleus	33.52	17.13
KXG26836	Sorghum	nucleus	32.42	16.71
OQU76347	Sorghum	nucleus	26.92	16.55
EES11214	Sorghum	nucleus	25.82	16.49
Os02t0655200-02	Rice	nucleus	30.77	16.28
HORVU2Hr1G098140.2	Barley	mitochondrion, nucleus	19.23	9.78

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra028690	EnsemblPlants:Bra028690.1
EnsemblPlants:Bra028690.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EIS5	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF43	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002543252	SEG:seg

Description

AT5G07580 (E=1e-041) | DNA binding / transcription factor

Coordinates

chrA02:+:2536441..2536989

Molecular Weight (calculated)

20655.8 Da

IEP (calculated)

5.473

GRAVY (calculated)

-1.027

Length

182 amino acids

Sequence
(BLAST)

001: MATFEESSDL DAIQKHLFED FMGDFDFDAS CVSGLWYIEP AMNQVPKQEP DSSSAHETDQ SVSTRKKAKR LEEEEEEQRR YRGVRRRPWG KFAAEIRDPA
101: KKGSRVWLGT FESDVDAARA YDCAAFKLRG RKAVLNFPLD AGKYEAPVNS GRKRKRSDVK EELQRSQGNS SSSSNDGETT CE

Best Arabidopsis Sequence Match ( AT5G07580.1 )
(BLAST)

001: MASFEESSDL EAIQSHLLED LLVCDGFMGD FDFDASFVSG LWCIEPHVPK QEPDSPVLDP DSFVNEFLQV EGESSSSSSP ELNSSSSTYE TDQSVKKAER
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF

Arabidopsis Description

ERF106Ethylene-responsive transcription factor ERF106 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY05]
SUBAcon: [golgi,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.