Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64966 | Canola | nucleus | 100.0 | 100.0 |
| CDY38399 | Canola | nucleus | 93.23 | 96.12 |
| Bra021049.1-P | Field mustard | nucleus | 80.45 | 76.16 |
| AT4G17490.1 | Thale cress | nucleus | 78.2 | 73.76 |
| Bra017493.1-P | Field mustard | nucleus | 59.4 | 53.74 |
| Bra024953.1-P | Field mustard | nucleus | 56.02 | 50.51 |
| Bra035732.1-P | Field mustard | nucleus | 34.96 | 42.86 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 35.34 | 41.05 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 36.47 | 40.25 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 36.47 | 40.08 |
| Bra023748.1-P | Field mustard | nucleus | 20.68 | 39.86 |
| Bra014925.1-P | Field mustard | nucleus | 20.68 | 39.57 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 28.57 | 38.78 |
| Bra027493.1-P | Field mustard | nucleus | 19.17 | 38.64 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 37.97 | 37.69 |
| Solyc03g093550.1.1 | Tomato | nucleus | 33.83 | 37.34 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 32.71 | 36.86 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 38.35 | 36.82 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 38.35 | 36.82 |
| Solyc03g093560.1.1 | Tomato | nucleus | 33.08 | 36.07 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 37.22 | 36.0 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 37.59 | 35.97 |
| Solyc03g093540.1.1 | Tomato | nucleus | 30.83 | 35.96 |
| PGSC0003DMT400086995 | Potato | nucleus | 33.08 | 35.92 |
| Bra015310.1-P | Field mustard | nucleus | 18.05 | 35.82 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 37.22 | 35.74 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 36.47 | 35.27 |
| PGSC0003DMT400027937 | Potato | nucleus | 33.46 | 35.18 |
| PGSC0003DMT400090475 | Potato | nucleus | 32.33 | 35.1 |
| KRG90129 | Soybean | nucleus | 34.59 | 34.59 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 34.21 | 34.47 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 14.29 | 34.23 |
| GSMUA_Achr11P... | Banana | nucleus | 24.44 | 34.21 |
| PGSC0003DMT400041327 | Potato | nucleus | 37.97 | 34.12 |
| Bra032512.1-P | Field mustard | nucleus | 17.67 | 34.06 |
| Zm00001d029940_P001 | Maize | nucleus | 30.45 | 33.61 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 29.7 | 33.47 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 30.45 | 33.47 |
| Bra014924.1-P | Field mustard | nucleus | 17.29 | 33.33 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 29.32 | 33.19 |
| KRH33374 | Soybean | nucleus | 34.59 | 32.74 |
| Bra032665.1-P | Field mustard | nucleus | 19.17 | 32.08 |
| Bra021047.1-P | Field mustard | nucleus | 21.8 | 32.04 |
| Bra028690.1-P | Field mustard | nucleus | 21.8 | 31.87 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 30.45 | 31.64 |
| OQU92128 | Sorghum | nucleus | 31.95 | 30.69 |
| Bra035919.1-P | Field mustard | nucleus | 22.18 | 29.06 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 33.83 | 28.48 |
| Bra024954.1-P | Field mustard | nucleus | 22.93 | 27.98 |
| Bra009250.1-P | Field mustard | nucleus | 22.18 | 27.96 |
| Zm00001d002761_P001 | Maize | nucleus | 33.08 | 27.94 |
| Bra012939.1-P | Field mustard | nucleus | 20.68 | 27.78 |
| Os04t0547600-01 | Rice | nucleus | 34.21 | 27.74 |
| Solyc05g052040.1.1 | Tomato | nucleus | 37.97 | 27.67 |
| Zm00001d017466_P001 | Maize | nucleus | 33.83 | 27.36 |
| Bra029319.1-P | Field mustard | nucleus | 22.93 | 27.35 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 30.83 | 27.06 |
| KXG31094 | Sorghum | nucleus | 34.59 | 26.9 |
| Bra022115.1-P | Field mustard | nucleus | 22.93 | 26.64 |
| EES11211 | Sorghum | nucleus | 32.33 | 26.63 |
| Zm00001d051340_P001 | Maize | nucleus | 34.21 | 26.61 |
| Bra017495.1-P | Field mustard | nucleus | 24.44 | 26.53 |
| KXG26835 | Sorghum | nucleus | 32.71 | 26.05 |
| EES11214 | Sorghum | nucleus | 27.82 | 25.96 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 32.71 | 25.89 |
| Bra040159.1-P | Field mustard | nucleus | 23.31 | 25.83 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 32.33 | 25.67 |
| Bra021048.1-P | Field mustard | nucleus | 24.44 | 25.59 |
| Os02t0655200-02 | Rice | nucleus | 33.08 | 25.58 |
| Zm00001d002760_P001 | Maize | nucleus | 34.21 | 25.56 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 32.71 | 25.51 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 33.08 | 25.51 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 31.95 | 25.3 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 32.33 | 25.07 |
| KXG26836 | Sorghum | nucleus | 33.08 | 24.93 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 29.7 | 24.92 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 29.7 | 24.84 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 29.7 | 24.69 |
| OQU76347 | Sorghum | nucleus | 25.94 | 23.31 |
| Bra012938.1-P | Field mustard | nucleus | 22.56 | 23.26 |
| Bra004873.1-P | Field mustard | nucleus | 18.8 | 21.55 |
| Bra037630.1-P | Field mustard | nucleus | 18.8 | 21.28 |
| Bra023749.1-P | Field mustard | nucleus | 8.27 | 18.33 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 23.68 | 17.6 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra040158 | EnsemblPlants:Bra040158.1 |
| EnsemblPlants:Bra040158.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4FGD0 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000067A4E0 | SEG:seg |
Description
AT4G17490 (E=2e-075) ATERF6, ERF-6-6 | ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6); DNA binding / transcription factor
Coordinates
chrA01:-:4383499..4384299
Molecular Weight (calculated)
29978.2 Da
IEP (calculated)
5.237
GRAVY (calculated)
-0.594
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPSETSAL FFIKKYLLDE LSPLPNATTT NPWETSSDFS FFGSFDQTGF DFPEFETKPE ITDTPLAPND SFTFQSNPPV VSQSNRKPPL KIAPPNRSEW
101: IQFAAGKPQR EQVPLPQVAA EEKRHYRGVR MRPWGKFAAE IRDPTRRGTR VWLGTFDTAI EAARAYDQAA FRLRGAKAIV NFPLEVGMWE PRAENGQNKR
201: KRDGAEEEET RVVAKVVKTE ESHGVEQVTS SLTGVDDWDL TEFLSMPLFS PLSPHPPFGY PQLTVV
101: IQFAAGKPQR EQVPLPQVAA EEKRHYRGVR MRPWGKFAAE IRDPTRRGTR VWLGTFDTAI EAARAYDQAA FRLRGAKAIV NFPLEVGMWE PRAENGQNKR
201: KRDGAEEEET RVVAKVVKTE ESHGVEQVTS SLTGVDDWDL TEFLSMPLFS PLSPHPPFGY PQLTVV
001: MATPNEVSAL FLIKKYLLDE LSPLPTTATT NRWMNDFTSF DQTGFEFSEF ETKPEIIDLV TPKPEIFDFD VKSEIPSESN DSFTFQSNPP RVTVQSNRKP
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
Arabidopsis Description
ERF6Ethylene-responsive transcription factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.