Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65883 | Canola | nucleus | 93.33 | 99.56 |
| Bra021047.1-P | Field mustard | nucleus | 60.83 | 80.66 |
| Bra021048.1-P | Field mustard | nucleus | 83.75 | 79.13 |
| AT4G17500.1 | Thale cress | nucleus | 81.67 | 73.13 |
| Bra024954.1-P | Field mustard | nucleus | 56.67 | 62.39 |
| Bra022115.1-P | Field mustard | nucleus | 58.75 | 61.57 |
| Bra017495.1-P | Field mustard | nucleus | 58.75 | 57.55 |
| KRH04192 | Soybean | nucleus | 52.92 | 50.6 |
| KRH57484 | Soybean | nucleus | 52.92 | 49.8 |
| KRH77323 | Soybean | nucleus | 54.58 | 47.81 |
| KRH28165 | Soybean | nucleus | 53.33 | 47.58 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 53.75 | 45.74 |
| Bra032665.1-P | Field mustard | nucleus | 26.67 | 40.25 |
| Bra014925.1-P | Field mustard | nucleus | 22.92 | 39.57 |
| Bra027493.1-P | Field mustard | nucleus | 21.67 | 39.39 |
| GSMUA_Achr11P... | Banana | nucleus | 43.33 | 38.81 |
| Bra023748.1-P | Field mustard | nucleus | 21.67 | 37.68 |
| Bra015310.1-P | Field mustard | nucleus | 20.83 | 37.31 |
| Bra032512.1-P | Field mustard | nucleus | 21.25 | 36.96 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 41.67 | 36.9 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 41.67 | 36.76 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 41.67 | 36.63 |
| Zm00001d026191_P001 | Maize | nucleus | 40.83 | 36.3 |
| Zm00001d002762_P001 | Maize | nucleus | 42.08 | 36.2 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 43.33 | 35.99 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 43.33 | 35.86 |
| Bra004873.1-P | Field mustard | nucleus | 34.58 | 35.78 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 30.42 | 35.61 |
| Bra037630.1-P | Field mustard | nucleus | 34.17 | 34.89 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 42.92 | 34.56 |
| Os02t0654700-01 | Rice | nucleus | 43.33 | 34.32 |
| OQU82076 | Sorghum | nucleus | 41.67 | 34.13 |
| Bra014924.1-P | Field mustard | nucleus | 19.58 | 34.06 |
| Zm00001d017462_P001 | Maize | nucleus | 40.0 | 34.04 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 41.67 | 33.11 |
| Os04t0546800-01 | Rice | nucleus | 42.92 | 32.39 |
| EES05793 | Sorghum | nucleus | 41.67 | 32.15 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 44.17 | 32.02 |
| Bra028690.1-P | Field mustard | nucleus | 23.75 | 31.32 |
| Bra009250.1-P | Field mustard | nucleus | 25.0 | 28.44 |
| Bra012939.1-P | Field mustard | nucleus | 22.92 | 27.78 |
| Bra035919.1-P | Field mustard | nucleus | 23.33 | 27.59 |
| Bra035732.1-P | Field mustard | nucleus | 23.33 | 25.81 |
| Bra029319.1-P | Field mustard | nucleus | 23.33 | 25.11 |
| Bra040158.1-P | Field mustard | nucleus | 25.83 | 23.31 |
| Bra017493.1-P | Field mustard | nucleus | 27.5 | 22.45 |
| Bra024953.1-P | Field mustard | nucleus | 27.5 | 22.37 |
| Bra012938.1-P | Field mustard | nucleus | 23.33 | 21.71 |
| Bra021049.1-P | Field mustard | nucleus | 24.58 | 21.0 |
| Bra023749.1-P | Field mustard | nucleus | 7.08 | 14.17 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra040159 | EnsemblPlants:Bra040159.1 |
| EnsemblPlants:Bra040159.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4FGD1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002545AE8 | SEG:seg |
Description
AT4G17500 (E=3e-084) ATERF-1 | ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor
Coordinates
chrA01:+:4389053..4389775
Molecular Weight (calculated)
26465.9 Da
IEP (calculated)
9.007
GRAVY (calculated)
-0.603
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVESDYSFL ESIRQYLLEE SELRLTESMV AQSGTTVHSV RPVYGRNSSF SKLYPCFSES WGDLPLKEND SEDMLVYGIL NDAFHGGWEP SSSSSDEDRS
101: SSATVKTDNF SAVDSVPAKK TSSVQAPVKG KHYRGVRERP WGKFAAEIRD PAKNGARVWL GTFETAEDAA LAYDKAAFRM RGSRALLNFP LRVNSGEPDP
201: VRIKSKRGSS SENRAPKRRR TVASAGQGTD VGLKVKCEIV
101: SSATVKTDNF SAVDSVPAKK TSSVQAPVKG KHYRGVRERP WGKFAAEIRD PAKNGARVWL GTFETAEDAA LAYDKAAFRM RGSRALLNFP LRVNSGEPDP
201: VRIKSKRGSS SENRAPKRRR TVASAGQGTD VGLKVKCEIV
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.