CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014113_P001	Maize	nucleus	81.16	81.75
TraesCS1B01G158400.1	Wheat	nucleus	70.29	81.51
TraesCS1D01G140900.1	Wheat	nucleus	69.57	80.67
TraesCS1A01G141800.1	Wheat	nucleus	69.57	80.67
HORVU1Hr1G037530.1	Barley	nucleus	63.77	71.54
KXG40163	Sorghum	nucleus	59.42	61.65
KRG95653	Soybean	nucleus	52.9	58.87
GSMUA_Achr1P15350_001	Banana	nucleus	49.28	57.14
KRH32175	Soybean	nucleus	54.35	54.74
KRH19547	Soybean	nucleus	54.35	54.35
Bra027493.1-P	Field mustard	nucleus	49.28	51.52
CDY32941	Canola	nucleus	49.28	51.52
KXG25362	Sorghum	nucleus	48.55	51.15
CDY50478	Canola	nucleus	48.55	50.76
CDY18225	Canola	nucleus	48.55	50.38
CDY60663	Canola	nucleus	48.55	50.0
Bra015310.1-P	Field mustard	nucleus	48.55	50.0
AT5G43410.1	Thale cress	nucleus	47.1	49.62
CDX77538	Canola	nucleus	44.2	48.8
AT3G23220.1	Thale cress	nucleus	48.55	48.2
CDY10057	Canola	nucleus	47.1	48.15
AT1G04370.1	Thale cress	nucleus	46.38	48.12
CDY53187	Canola	nucleus	46.38	47.41
KXG35151	Sorghum	nucleus	44.2	47.29
Bra032512.1-P	Field mustard	nucleus	47.1	47.1
Bra014924.1-P	Field mustard	nucleus	45.65	45.65
CDX85070	Canola	nucleus	44.93	44.93
CDY35515	Canola	nucleus	36.23	31.25
Bra023749.1-P	Field mustard	nucleus	23.91	27.5
OQU92128	Sorghum	nucleus	41.3	20.58
OQU82076	Sorghum	nucleus	39.13	18.43
EES11214	Sorghum	nucleus	36.23	17.54
EES11211	Sorghum	nucleus	39.86	17.03
KXG26835	Sorghum	nucleus	40.58	16.77
EES05793	Sorghum	nucleus	37.68	16.72
OQU76347	Sorghum	nucleus	35.51	16.55
KXG31094	Sorghum	nucleus	40.58	16.37
KXG26836	Sorghum	nucleus	39.86	15.58

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A1B6QKL0	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	EnsemblPlants:KXG38440	ProteinID:KXG38440	ProteinID:KXG38440.1	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF42	SMART:SM00380	EnsemblPlantsGene:SORBI_3001G234500
SUPFAM:SSF54171	UniParc:UPI0003C68D59	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:23137237..23137653

Molecular Weight (calculated)

14247.5 Da

IEP (calculated)

9.581

GRAVY (calculated)

-0.591

Length

138 amino acids

Sequence
(BLAST)

001: MEGGKDAAGG GGTKYRGVRK RPWGKFAAEI RDPERGGARV WLGTFDTAEE AARAYDRAAF AQRGATAVLN FPGEIAGATR RGAGGSSSSS SAAAAAAPAA
101: ASLRATGRGR GDGEKIELEC LDDKILEDLL DDGKYGRK

Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)

001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR

Arabidopsis Description

ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.