Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014925.1-P | Field mustard | nucleus | 98.55 | 97.84 |
| CDX77537 | Canola | nucleus | 98.55 | 97.84 |
| CDY35516 | Canola | nucleus | 91.3 | 91.3 |
| AT3G23230.1 | Thale cress | nucleus | 89.86 | 89.21 |
| KRG92310 | Soybean | nucleus | 58.7 | 60.45 |
| CDY08986 | Canola | nucleus | 92.03 | 59.91 |
| KRH34484 | Soybean | nucleus | 60.87 | 59.57 |
| VIT_05s0049g00500.t01 | Wine grape | nucleus | 64.49 | 58.55 |
| KRH12208 | Soybean | nucleus | 50.0 | 57.02 |
| KRH31710 | Soybean | nucleus | 55.8 | 56.2 |
| KRH37227 | Soybean | nucleus | 48.55 | 54.92 |
| CDY60663 | Canola | nucleus | 52.9 | 54.48 |
| CDY18225 | Canola | nucleus | 52.17 | 54.14 |
| CDY10057 | Canola | nucleus | 52.9 | 54.07 |
| KRH37228 | Soybean | nucleus | 53.62 | 54.01 |
| CDY32941 | Canola | nucleus | 51.45 | 53.79 |
| CDY53187 | Canola | nucleus | 52.17 | 53.33 |
| CDY50478 | Canola | nucleus | 50.72 | 53.03 |
| KRH12207 | Soybean | nucleus | 50.0 | 52.27 |
| CDX77538 | Canola | nucleus | 47.1 | 52.0 |
| KRH37226 | Soybean | nucleus | 43.48 | 50.85 |
| Solyc09g089920.1.1 | Tomato | nucleus | 55.8 | 50.66 |
| PGSC0003DMT400097075 | Potato | nucleus | 52.9 | 50.0 |
| CDX85070 | Canola | nucleus | 47.1 | 47.1 |
| PGSC0003DMT400034984 | Potato | nucleus | 52.9 | 46.5 |
| Solyc03g005510.1.1 | Tomato | nucleus, plastid | 52.9 | 41.71 |
| CDY35515 | Canola | nucleus | 42.75 | 36.88 |
| CDY38052 | Canola | nucleus | 38.41 | 31.93 |
| CDX76569 | Canola | nucleus | 38.41 | 29.44 |
| CDY40779 | Canola | nucleus | 36.96 | 28.02 |
| CDY14036 | Canola | nucleus | 36.23 | 26.45 |
| CDY33523 | Canola | nucleus | 41.3 | 26.39 |
| CDX77750 | Canola | nucleus | 42.03 | 26.13 |
| CDY68787 | Canola | nucleus | 42.03 | 25.78 |
| CDY56473 | Canola | nucleus | 42.03 | 25.11 |
| CDY16811 | Canola | nucleus | 36.23 | 24.88 |
| CDY02130 | Canola | nucleus | 35.51 | 24.75 |
| CDY23053 | Canola | nucleus | 35.51 | 24.75 |
| CDX74692 | Canola | nucleus | 41.3 | 24.57 |
| CDY43434 | Canola | nucleus | 40.58 | 24.56 |
| CDX71695 | Canola | nucleus | 39.13 | 24.55 |
| CDX87222 | Canola | nucleus | 35.51 | 24.38 |
| CDY60497 | Canola | nucleus | 36.23 | 24.27 |
| CDY30489 | Canola | nucleus | 40.58 | 24.14 |
| CDY05842 | Canola | nucleus | 38.41 | 24.09 |
| CDY65883 | Canola | nucleus | 39.13 | 24.0 |
| CDY28965 | Canola | nucleus | 39.86 | 23.91 |
| CDY38401 | Canola | nucleus | 39.13 | 23.79 |
| CDY42869 | Canola | nucleus | 37.68 | 23.74 |
| CDY64666 | Canola | nucleus | 36.23 | 23.7 |
| CDY25978 | Canola | nucleus | 40.58 | 23.33 |
| CDY23459 | Canola | nucleus | 39.86 | 23.21 |
| CDY67760 | Canola | nucleus | 37.68 | 23.11 |
| CDY27923 | Canola | nucleus | 39.86 | 21.57 |
| CDY38399 | Canola | nucleus | 39.86 | 21.32 |
| CDY64966 | Canola | nucleus | 39.86 | 20.68 |
| CDX76570 | Canola | nucleus | 39.86 | 19.64 |
| CDY02129 | Canola | nucleus | 35.51 | 19.52 |
| CDY23052 | Canola | nucleus | 35.51 | 19.14 |
| CDY27922 | Canola | nucleus | 25.36 | 18.42 |
| CDY64687 | Canola | nucleus | 36.96 | 17.77 |
| CDY41042 | Canola | nucleus | 37.68 | 17.75 |
| CDY25977 | Canola | nucleus | 37.68 | 17.57 |
| CDX77755 | Canola | nucleus | 37.68 | 16.77 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078D717 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX85071 | ProteinID:CDX85071 | ProteinID:CDX85071.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00142536001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF68 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EE066A | SEG:seg | : | : |
Description
BnaC07g08350D
Coordinates
chrLK031840:-:118724..119140
Molecular Weight (calculated)
15919.2 Da
IEP (calculated)
8.848
GRAVY (calculated)
-1.089
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGPNRRSNS QAQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEDAARAY DRAAFNLRGH LAILNFPNEY YSRMDDYALR PPYSSSSSSS
101: GSTSTGVSRQ NQREVFEFEY LDGRVLEELL DSEEEKKR
101: GSTSTGVSRQ NQREVFEFEY LDGRVLEELL DSEEEKKR
001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
Arabidopsis Description
ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.