Factsheet for HORVU4Hr1G080300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G316800.1	Wheat	nucleus	94.31	95.08
TraesCS4A01G416000.1	Wheat	nucleus	94.31	94.31
TraesCS4D01G313400.1	Wheat	nucleus	93.5	94.26
Zm00001d027686_P001	Maize	nucleus	80.49	76.15
Os04t0257500-01	Rice	nucleus	76.42	73.44
KXG40163	Sorghum	nucleus	78.86	72.93
HORVU1Hr1G037530.1	Barley	nucleus	67.48	67.48
Os03t0150200-00	Rice	nucleus	72.36	63.12
Zm00001d027687_P001	Maize	plastid	34.96	58.11
GSMUA_Achr1P15350_001	Banana	nucleus	56.1	57.98
KRG95653	Soybean	nucleus	55.28	54.84
HORVU5Hr1G017540.1	Barley	nucleus	52.03	50.79
CDY50478	Canola	nucleus	52.03	48.48
CDX77538	Canola	nucleus	48.78	48.0
KRH19547	Soybean	nucleus	53.66	47.83
Bra027493.1-P	Field mustard	nucleus	51.22	47.73
CDY32941	Canola	nucleus	51.22	47.73
KRH32175	Soybean	nucleus	52.85	47.45
HORVU0Hr1G010370.3	Barley	nucleus	50.41	46.62
AT1G04370.1	Thale cress	nucleus	50.41	46.62
AT5G43410.1	Thale cress	nucleus	49.59	46.56
Bra014924.1-P	Field mustard	nucleus	52.03	46.38
CDX85070	Canola	nucleus	52.03	46.38
AT3G23220.1	Thale cress	nucleus	51.22	45.32
CDY18225	Canola	nucleus	48.78	45.11
CDY60663	Canola	nucleus	48.78	44.78
Bra015310.1-P	Field mustard	nucleus	48.78	44.78
HORVU4Hr1G000960.1	Barley	nucleus	47.97	44.03
CDY53187	Canola	nucleus	47.97	43.7
CDY10057	Canola	nucleus	47.97	43.7
Bra032512.1-P	Field mustard	nucleus	47.97	42.75
CDY35515	Canola	nucleus	41.46	31.88
Bra023749.1-P	Field mustard	nucleus	27.64	28.33
HORVU1Hr1G055710.1	Barley	nucleus	42.28	21.49
HORVU6Hr1G062430.1	Barley	nucleus	43.09	17.49
HORVU6Hr1G062380.3	Barley	nucleus	35.77	14.57
HORVU2Hr1G098140.2	Barley	mitochondrion, nucleus	22.76	7.82

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G080300	EnsemblPlants:HORVU4Hr1G080300.1
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0VDL6	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF42	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296DAF1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:614889111..614889954

Molecular Weight (calculated)

13385.4 Da

IEP (calculated)

5.358

GRAVY (calculated)

-0.823

Length

123 amino acids

Sequence
(BLAST)

001: MEDDKKEGKY RGVRKRPWGK FAAEIRDPER GGSRVWLGTF DTAEEAARAY DRAAFAQKGA TAVLNFPGEA GRMSGGGGSS SSSGAATAAA SRRVPDTEKV
101: ELEYLDDRVL DELLAEEYYS SKK

Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)

001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR

Arabidopsis Description

ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.