CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

cytosol: 23758924
nucleus: 23758924

gfp PMID: 23758924 doi

W Liang, B Yang, BJ Yu, Z Zhou, C Li, M Jia, Y Sun, Y Zhang, F Wu, H Zhang, B Wang, MK Deyholos, YQ Jiang

State Key Laboratory of Crop Stress Biology for Arid Areas and College of Life Sciences, Northwest A & F University, Yangling, Shaanxi 712100, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022276.1-P	Field mustard	plastid	96.79	96.46
CDX92190	Canola	plastid	96.62	96.3
AT3G18040.3	Thale cress	plastid	90.71	82.87
Zm00001d030169_P001	Maize	cytosol	38.18	82.78
KRH39091	Soybean	cytosol	67.91	78.36
CDX92058	Canola	cytosol	39.36	76.9
TraesCS3B01G260900.1	Wheat	cytosol	61.15	73.88
Zm00001d011465_P001	Maize	cytosol	60.81	73.62
TraesCS3D01G221700.1	Wheat	cytosol	60.64	73.57
OQU87226	Sorghum	cytosol	61.49	73.54
Os02t0135200-00	Rice	cytosol, plasma membrane	31.08	73.31
KRH41801	Soybean	cytosol, mitochondrion	72.64	73.01
KRH60506	Soybean	cytosol	72.97	72.73
Os01t0643800-01	Rice	cytosol, plasma membrane	61.49	72.65
TraesCS3A01G231700.1	Wheat	cytosol	60.14	72.65
Solyc06g068990.2.1	Tomato	cytosol, mitochondrion	73.65	72.55
VIT_17s0000g02570.t01	Wine grape	mitochondrion	73.31	72.21
GSMUA_Achr4P11240_001	Banana	cytosol	53.04	72.18
PGSC0003DMT400006281	Potato	cytosol	69.43	71.48
PGSC0003DMT400074096	Potato	cytosol	72.97	71.41
Solyc12g040680.1.1	Tomato	cytosol	69.26	71.3
EER88927	Sorghum	cytosol	68.92	71.08
GSMUA_Achr4P03750_001	Banana	cytosol	63.51	70.94
GSMUA_Achr1P20760_001	Banana	cytosol, mitochondrion	71.28	70.33
KRH48627	Soybean	cytosol	70.27	70.03
Os06t0708000-01	Rice	nucleus	68.58	70.0
CDX83865	Canola	cytosol	33.78	69.93
HORVU3Hr1G057660.12	Barley	cytosol, mitochondrion, plastid	47.47	69.73
HORVU7Hr1G095810.7	Barley	cytosol	68.07	69.72
TraesCS7A01G410700.2	Wheat	cytosol	68.07	69.72
TraesCS7B01G309900.1	Wheat	cytosol	68.07	69.72
GSMUA_Achr9P00750_001	Banana	mitochondrion	71.79	69.56
CDX81862	Canola	cytosol	68.24	69.54
CDY40377	Canola	cytosol	57.26	69.47
CDY17674	Canola	cytosol	57.09	69.4
CDY41084	Canola	cytosol	57.09	69.4
CDY21718	Canola	cytosol	67.74	69.38
TraesCS7D01G403700.1	Wheat	cytosol	68.07	69.36
CDX77826	Canola	cytosol	56.93	69.2
CDY26184	Canola	cytosol	67.91	69.19
CDY60775	Canola	cytosol	67.91	68.84
CDY11098	Canola	mitochondrion	66.89	68.63
CDX68218	Canola	mitochondrion	66.72	68.58
KXG29415	Sorghum	cytosol	56.42	68.16
Zm00001d053997_P003	Maize	cytosol	56.93	66.73
Os05t0576800-01	Rice	plasma membrane	65.37	66.49
EES18732	Sorghum	mitochondrion	65.2	65.2
TraesCS1D01G422800.1	Wheat	mitochondrion	66.55	65.12
TraesCS1B01G445300.1	Wheat	mitochondrion	66.39	65.07
Zm00001d039105_P001	Maize	mitochondrion	65.71	64.73
TraesCS1A01G415300.1	Wheat	mitochondrion	66.05	64.52
TraesCS6A01G099600.1	Wheat	peroxisome	54.39	64.4
TraesCS6B01G127800.1	Wheat	peroxisome	54.05	64.26
TraesCS6D01G082900.2	Wheat	peroxisome	54.39	63.76
HORVU1Hr1G090940.17	Barley	plastid	66.39	63.39
CDX92566	Canola	cytosol	59.8	63.1
CDY13942	Canola	cytosol	59.63	63.04
CDY66706	Canola	cytosol	58.28	61.72
CDX70861	Canola	cytosol	58.11	61.54
Zm00001d014726_P003	Maize	cytosol	63.68	60.22
CDY63829	Canola	peroxisome	56.08	58.14
CDX79842	Canola	cytosol	58.45	56.08
CDY60212	Canola	cytosol	52.2	55.08
CDY25849	Canola	cytosol	52.2	54.69
CDX97596	Canola	cytosol	54.73	54.64
CDX98489	Canola	cytosol	54.73	54.09
Zm00001d036448_P019	Maize	mitochondrion	54.39	53.76
CDY20079	Canola	cytosol	53.89	52.9
CDY60195	Canola	cytosol	58.61	52.82
CDY32347	Canola	cytosol	53.72	52.74
CDY45117	Canola	cytosol	52.53	52.53
CDY42817	Canola	cytosol	56.93	52.49
CDY24091	Canola	cytosol	52.03	52.47
CDX83515	Canola	cytosol	57.09	52.4
CDX99153	Canola	cytosol	27.36	48.65
CDX86029	Canola	cytosol	29.56	47.3
CDX79801	Canola	cytosol	29.56	44.64
CDY17911	Canola	cytosol	29.39	44.39
CDY44256	Canola	cytosol	29.56	44.3
CDX83459	Canola	cytosol	29.39	44.05
CDX74352	Canola	cytosol	27.7	43.97
CDX91889	Canola	cytosol	27.7	43.97
CDY22716	Canola	cytosol	27.53	43.94
CDY18876	Canola	cytosol	26.69	43.89
CDX74788	Canola	cytosol	26.52	43.61
CDY27334	Canola	cytosol	26.52	43.61
CDY37087	Canola	cytosol	26.35	43.33
CDY13253	Canola	cytosol	27.2	43.16
CDY06283	Canola	cytosol	27.03	43.13
CDX93447	Canola	cytosol	26.86	43.09
CDX94915	Canola	cytosol	26.69	42.82
CDY46308	Canola	cytosol	26.52	42.66
CDY05979	Canola	cytosol	28.72	42.5
CDY44551	Canola	cytosol	26.52	42.43
CDY05980	Canola	cytosol	27.53	41.9
CDY45885	Canola	cytosol	26.18	41.89
CDX71876	Canola	cytosol	28.21	41.85
CDY45782	Canola	cytosol	27.53	41.69
CDX89034	Canola	cytosol	27.36	41.12
CDX89033	Canola	cytosol	26.86	40.77
CDY53276	Canola	cytosol	26.52	37.56
CDX67813	Canola	cytosol	27.2	35.7
CDX86793	Canola	cytosol	27.53	34.83
CDX98395	Canola	cytosol	27.2	34.04
CDY30325	Canola	endoplasmic reticulum, plasma membrane	26.52	33.55

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:A0A078IFE9	UniProt:A0A078IFE9
EnsemblPlants:CDY49620	ProteinID:CDY49620	ProteinID:CDY49620.1	ncoils:Coil	GO:GO:0000165	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00093472001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:MAP_kinase_CS	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS01351
PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF246	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	UniParc:UPI0004EEF3F3	SEG:seg	:	:	:

Description

BnaCnng17720DMitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078IFE9]

Coordinates

chrLK032848:-:25257..29107

Molecular Weight (calculated)

67968.7 Da

IEP (calculated)

7.615

GRAVY (calculated)

-0.619

Length

592 amino acids

Sequence
(BLAST)

001: MGATHSTNVN NNHSHSKIHT TNSSRQCGAS DRLAVSNLRS QLTTIYRNHE DEEEDEEEEE EEEEARRFAL VRDFDLSGLK RIRVPRRNHI LMDPHKKVAL
101: ETEFFTEYGE ASRYQIQEVI GKGSYGVVAS AIDTHTGEKV AIKKINDVFE HVSDATRILR EIKLLRLLRH PDIVEIKHVM LPPSRREFRD IYVVFELMES
201: DLHQVIKAND DLTPEHYQFF LYQLLRGLKF IHTANVFHRD LKPKNILANS DCKLKICDFG LARVSFNDAP SAIFWTDYVA TRWYRAPELC GSFFSKYTPA
301: IDIWSIGCIF AEMLTGKPLF PGKNVVHQLD IMTDLLGTPS PEAISRIRNE KARRYLGNMR RKPPVPFTHK FPHVDPLALR LLHRLLAFDP KDRPTAEEAL
401: ADPYFYGLAN VDREPSTQPI PKLEFEFERR KIMKEDVREL IYREILEYHP RMLQEYLRGG EQTSFMYPSG VDRFKRQFAH LEEHYGKGER SAPLQQRHAS
501: LPRERVPAPK EENRPAATLA TTPESPQSSQ HEGSNYMNGM SQTGYSARSL LKSASISASK CIGVKQRNQS EHGESNSDAT DALSQKAAAL HT

Best Arabidopsis Sequence Match ( AT3G18040.4 )
(BLAST)

001: MGASHSTNVN NHPHSRNASN HPLTNSNSTS SRHSASSSDR LSVSNLRSQL TTIYRNQEEE EEEEEEEEEE EEGGKEKRAE EEAKSFSLVR DFDLSGLNCI
101: RVSRRNYILM DPHKKVALET EFFTEYGEAS RYQIQEVIGK GSYGVVASAI DTHSGEKVAI KKINDVFEHV SDATRILREI KLLRLLRHPD IVEIKHVMLP
201: PSRREFRDIY VVFELMESDL HQVIKANDDL TPEHYQFFLY QLLRGLKFIH TANVFHRDLK PKNILANSDC KLKICDFGLA RVSFNDAPSA IFWTDYVATR
301: WYRAPELCGS FFSKYTPAID IWSIGCIFAE MLTGKPLFPG KNVVHQLDIM TDLLGTPPPE AIARIRNEKA RRYLGNMRRK PPVPFTHKFP HVDPLALRLL
401: HRLLAFDPKD RPSAEEALAD PYFYGLANVD REPSTQPIPK LEFEFERRKI TKEDVRELIY REILEYHPQM LQEYLRGGEQ TSFMYPSGVD RFKRQFAHLE
501: ENYGKGEKGS PLQRQHASLP RERVPAPKKE NGSHNHDIEN RSIASLVTTL ESPPTSQHEG SDYRNGTSQT GYSARSLLKS ASISASKCIG MKPRNKSEYG
601: ESNNDTVDAL SQKVAALHT

Arabidopsis Description

MPK9Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRW0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.