CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68224
CDX79842
CDX82067
CDX83515
CDY11103
CDY42817
CDY60195
CDY71921

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42880.1	CDX68224	AT1G73500.1	19513235
AT2G42880.1	CDX82067	AT1G73500.1	19513235
AT2G42880.1	CDY11103	AT1G73500.1	19513235
AT2G42880.1	CDY71921	AT1G73500.1	19513235
AT2G42880.1	CDX79842	AT2G42880.1	19513235
AT2G42880.1	CDX83515	AT2G42880.1	19513235
AT2G42880.1	CDY42817	AT2G42880.1	19513235
AT2G42880.1	CDY60195	AT2G42880.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000277.1-P	Field mustard	cytosol	97.51	97.05
CDX83515	Canola	cytosol	97.51	97.05
AT2G42880.1	Thale cress	cytosol	85.83	90.92
CDX79842	Canola	cytosol	86.29	89.79
CDY60195	Canola	cytosol	89.1	87.06
TraesCS7D01G342800.3	Wheat	cytosol	51.25	78.15
TraesCS7B01G246900.3	Wheat	cytosol	51.25	78.15
TraesCS7A01G335300.2	Wheat	cytosol	51.25	78.15
HORVU7Hr1G082510.4	Barley	cytosol	51.09	77.91
VIT_12s0142g00130.t01	Wine grape	cytosol	70.25	73.93
Solyc07g056350.2.1	Tomato	cytosol	68.69	71.01
PGSC0003DMT400044709	Potato	cytosol	67.76	70.96
KRH46057	Soybean	cytosol	67.91	70.89
KRG98916	Soybean	cytosol	67.6	70.68
CDX92058	Canola	cytosol	33.18	70.3
GSMUA_Achr6P27100_001	Banana	cytosol	66.2	69.79
GSMUA_Achr9P06770_001	Banana	cytosol	63.71	69.68
KRH14477	Soybean	cytosol	66.2	69.56
Os01t0629900-01	Rice	cytosol	64.64	67.92
KXG32937	Sorghum	cytosol	64.8	67.86
TraesCS3B01G256700.1	Wheat	cytosol	62.93	67.11
KRH73659	Soybean	cytosol	65.58	66.93
TraesCS3A01G228000.1	Wheat	cytosol	63.55	66.56
HORVU3Hr1G056200.1	Barley	cytosol	63.55	66.45
TraesCS3D01G225600.1	Wheat	cytosol	63.4	66.39
CDY60212	Canola	cytosol	55.45	63.46
CDY25849	Canola	cytosol	55.45	63.01
Zm00001d011426_P002	Maize	cytosol	64.95	62.99
CDY20079	Canola	cytosol	58.72	62.52
CDX97596	Canola	cytosol	57.63	62.39
CDY32347	Canola	cytosol	58.57	62.35
CDY13942	Canola	cytosol	54.36	62.32
Os06t0367900-01	Rice	cytosol	55.3	62.28
CDX98489	Canola	cytosol	57.94	62.1
CDX92566	Canola	cytosol	54.21	62.03
CDY41084	Canola	cytosol	46.88	61.81
CDY66706	Canola	cytosol	53.74	61.72
CDX70861	Canola	cytosol	53.74	61.72
CDY40377	Canola	cytosol	46.88	61.68
CDY17674	Canola	cytosol	46.73	61.6
CDX77826	Canola	cytosol	46.57	61.4
CDY45117	Canola	cytosol	56.23	60.98
CDY24091	Canola	cytosol	55.61	60.82
GSMUA_AchrUn_...	Banana	nucleus	57.48	59.13
CDY49620	Canola	cytosol, nucleus	52.49	56.93
CDX92190	Canola	plastid	52.65	56.9
CDX83865	Canola	cytosol	25.08	56.29
CDY26184	Canola	cytosol	50.16	55.42
CDY21718	Canola	cytosol	49.84	55.36
CDY60775	Canola	cytosol	50.16	55.14
CDX81862	Canola	cytosol	49.84	55.08
CDX68218	Canola	mitochondrion	48.6	54.17
CDY11098	Canola	mitochondrion	48.6	54.07
CDY63829	Canola	peroxisome	47.04	52.89
CDX99153	Canola	cytosol	25.08	48.35
CDX86029	Canola	cytosol	26.64	46.22
CDX74352	Canola	cytosol	26.32	45.31
CDX91889	Canola	cytosol	26.32	45.31
CDX79801	Canola	cytosol	27.41	44.9
CDY13253	Canola	cytosol	26.01	44.77
CDY17911	Canola	cytosol	27.26	44.64
CDX83459	Canola	cytosol	27.26	44.3
CDY44256	Canola	cytosol	27.26	44.3
CDY22716	Canola	cytosol	25.55	44.2
CDY18876	Canola	cytosol	24.3	43.33
CDX74788	Canola	cytosol	24.3	43.33
CDY06283	Canola	cytosol	24.92	43.13
CDX94915	Canola	cytosol	24.77	43.09
CDX93447	Canola	cytosol	24.77	43.09
CDY27334	Canola	cytosol	24.14	43.06
CDY37087	Canola	cytosol	23.99	42.78
CDY44551	Canola	cytosol	24.45	42.43
CDY05980	Canola	cytosol	25.7	42.42
CDY46308	Canola	cytosol	24.3	42.39
CDY05979	Canola	cytosol	26.32	42.25
CDY45885	Canola	cytosol	24.14	41.89
CDY45782	Canola	cytosol	25.23	41.43
CDX71876	Canola	cytosol	25.55	41.1
CDX89033	Canola	cytosol	24.61	40.51
CDX89034	Canola	cytosol	24.77	40.36
CDY53276	Canola	cytosol	24.3	37.32
CDX67813	Canola	cytosol	25.7	36.59
CDX86793	Canola	cytosol	26.17	35.9
CDX98395	Canola	cytosol	25.7	34.88
CDY30325	Canola	endoplasmic reticulum, plasma membrane	24.3	33.33

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:A0A078HY62	UniProt:A0A078HY62
EnsemblPlants:CDY42817	ProteinID:CDY42817	ProteinID:CDY42817.1	GO:GO:0000165	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00075498001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:MAP_kinase_CS	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF195	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0004EF220B
SEG:seg	:	:	:	:	:

Description

BnaC03g23890DMitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078HY62]

Coordinates

chrLK032535:+:166029..168729

Molecular Weight (calculated)

72754.0 Da

IEP (calculated)

9.196

GRAVY (calculated)

-0.460

Length

642 amino acids

Sequence
(BLAST)

001: MEFFSDYGDA TRFKIQERIG KGSYGVVCSA VDTLTGEKVA IKKIHDIFEH ISDAARILRE IKLLRLLRHP DIVEIKHIML PPSRREFKDI YVVFELMESD
101: LHQVIKANDD LTREHYQFFL YQLLRALKYI HTANVYHRDL KPKNILANAN CKLKICDFGL ARVAFNDTPT TIIWTDYVAT RWYRAPELCG SFYSKYTPAI
201: DIWSIGCIFA EVLMGKPLFP GKNVVHQLDL MTDLLGTPSL DTISRVRNEK ARRYLTSMRK KPPIPFTQKF PNADPLSLKL LERLLAFDPK DRPTAQEALA
301: DPYFKGLAKV EREPSCQPIT KMEFEFERRK VTKEDIRELI SREILEYHPQ LLKDHMNGAD KTNFLYPSAV DQFRRQFAHL EENSGKTGPV APLERKHASL
401: PRSTVIHSTA VARGGQPKLM NNTNTLNPET TQNIPLNQYT TSQAPQRNLS GTKPITFMGP VAPYDNGRTS REAYDPRSLI RSTALPFPQQ SAAATVGKQQ
501: ERRTTTMESE KQARQISQYN RYSPDVAINI DNNPFILSRT GLHKAENRSD RIIIDTNLLQ ATAGIGVAAA AAAPGGSAHR KVGAVRNDRQ GSDVLTFREL
601: LATEDVAEFT VDAHDDDDGT TNTCGSKSPY YTEITLFFLI SR

Best Arabidopsis Sequence Match ( AT2G42880.1 )
(BLAST)

001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY

Arabidopsis Description

MPK20Mitogen-activated protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.