Factsheet for TraesCS3D01G225600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G228000.1
TraesCS3B01G256700.1
TraesCS3D01G225600.1
TraesCS7A01G335300.2
TraesCS7B01G246900.3
TraesCS7D01G342800.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42880.1	TraesCS3A01G228000.1	AT2G42880.1	19513235
AT2G42880.1	TraesCS3B01G256700.1	AT2G42880.1	19513235
AT2G42880.1	TraesCS3D01G225600.1	AT2G42880.1	19513235
AT2G42880.1	TraesCS7A01G335300.2	AT2G42880.1	19513235
AT2G42880.1	TraesCS7B01G246900.3	AT2G42880.1	19513235
AT2G42880.1	TraesCS7D01G342800.3	AT2G42880.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G228000.1	Wheat	cytosol	99.84	99.84
TraesCS3B01G256700.1	Wheat	cytosol	97.88	99.67
HORVU3Hr1G056200.1	Barley	cytosol	97.88	97.72
Os01t0629900-01	Rice	cytosol	90.21	90.51
KXG32937	Sorghum	cytosol	89.89	89.89
Zm00001d011426_P002	Maize	cytosol	87.6	81.12
TraesCS7D01G342800.3	Wheat	cytosol	54.98	80.05
KRH46057	Soybean	cytosol	74.71	74.47
KRG98916	Soybean	cytosol	74.55	74.43
VIT_12s0142g00130.t01	Wine grape	cytosol	72.27	72.62
PGSC0003DMT400044709	Potato	cytosol	72.27	72.27
Solyc07g056350.2.1	Tomato	cytosol	72.27	71.34
KRH14477	Soybean	cytosol	70.15	70.38
AT2G42880.1	Thale cress	cytosol	69.0	69.8
TraesCS3D01G242200.2	Wheat	cytosol	66.39	69.69
CDX79842	Canola	cytosol	69.82	69.37
TraesCS1D01G428900.1	Wheat	cytosol	67.37	68.95
KRH73659	Soybean	cytosol	70.47	68.68
Bra004727.1-P	Field mustard	cytosol	58.24	67.36
TraesCS1D01G410100.1	Wheat	cytosol	60.36	66.67
CDY60195	Canola	cytosol	69.0	64.38
TraesCS3D01G221700.1	Wheat	cytosol	50.73	63.73
CDY42817	Canola	cytosol	66.39	63.4
TraesCS1D01G088000.2	Wheat	cytosol	56.93	63.11
Bra000277.1-P	Field mustard	cytosol	66.39	63.1
CDX83515	Canola	cytosol	66.39	63.1
TraesCS6D01G082900.2	Wheat	peroxisome	46.98	57.03
TraesCS7D01G403700.1	Wheat	cytosol	53.51	56.45
TraesCS1D01G422800.1	Wheat	mitochondrion	50.57	51.24
TraesCS4D01G198600.1	Wheat	cytosol	27.57	45.8
TraesCS1D01G192200.1	Wheat	cytosol	28.06	45.74
TraesCS7D01G106400.1	Wheat	cytosol	28.55	44.53
TraesCS7D01G414700.1	Wheat	cytosol	26.59	44.17
TraesCS6D01G108100.1	Wheat	cytosol	26.92	43.19
TraesCS7D01G414900.1	Wheat	cytosol	26.26	42.71
TraesCS7D01G295900.1	Wheat	cytosol	26.92	42.64
TraesCS5D01G303300.1	Wheat	cytosol	19.9	41.08

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:MAP_kinase_CS	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF195	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	EnsemblPlantsGene:TraesCS3D01G225600
EnsemblPlants:TraesCS3D01G225600.1	TIGR:cd07859	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:307227153..307233106

Molecular Weight (calculated)

69888.4 Da

IEP (calculated)

9.227

GRAVY (calculated)

-0.554

Length

613 amino acids

Sequence
(BLAST)

001: MQQDQRKKSS AEAEFFTEYG DASRYKIQEI VGKGSYGVVC SAIDVHTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRRDFK
101: DIYVVFELME SDLHQVIKAN DDLTKEHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN SNCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDVWSIGCI FAEVLTGKPL FPGKNVVHQL DLMTDLLGTP SMDTISRVRN EKARRYLSSM RKKELISFSH KFPNADPLAL DLLQRLLAFD
301: PKDRPTAEEA LSHPYFKGLA KVEREPSCQP ITKMEFEFER RRVTKEDIRE LIFREILEYH PQLLKDYTNG TERTTFLYPS AVDQFRKQFA HLEENSENGP
401: VVPMDRKHTS LPRSTIVHSA PIHGKEQPRI GPSRDKPSPD ESYKNHRDSE KYSGNVQRTS QAPQRVPTAR PGRVVGPVLP YENVGMKDTY DPRRVAAMSS
501: GYPPQQQIPQ IYGYYQTPAK SACSEPSQAE MYTLHQQAYA CANSSTVPDV ALDMRAPPFH QSAGPKRGSS DRLSAESNLY SRSLNGMAPT TTGVAASAHR
601: KVGVVPYGMS QMY

Best Arabidopsis Sequence Match ( AT2G42880.1 )
(BLAST)

001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY

Arabidopsis Description

MPK20Mitogen-activated protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.