Factsheet for PGSC0003DMT400044709

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400044709
PGSC0003DMT400083995

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42880.1	PGSC0003DMT400083995	AT1G73500.1	19513235
AT2G42880.1	PGSC0003DMT400044709	AT2G42880.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g056350.2.1	Tomato	cytosol	98.53	97.26
TraesCS7B01G246900.3	Wheat	cytosol	56.12	81.71
TraesCS7D01G342800.3	Wheat	cytosol	56.12	81.71
HORVU7Hr1G082510.4	Barley	cytosol	56.12	81.71
TraesCS7A01G335300.2	Wheat	cytosol	55.95	81.47
KRH14477	Soybean	cytosol	75.86	76.1
GSMUA_Achr6P27100_001	Banana	cytosol	75.2	75.7
GSMUA_Achr9P06770_001	Banana	cytosol	72.1	75.3
AT2G42880.1	Thale cress	cytosol	73.9	74.75
KRH73659	Soybean	cytosol	75.2	73.29
CDX79842	Canola	cytosol	73.57	73.1
TraesCS3B01G256700.1	Wheat	cytosol	71.78	73.09
Os01t0629900-01	Rice	cytosol	72.59	72.83
KXG32937	Sorghum	cytosol	72.76	72.76
TraesCS3A01G228000.1	Wheat	cytosol	72.43	72.43
TraesCS3D01G225600.1	Wheat	cytosol	72.27	72.27
HORVU3Hr1G056200.1	Barley	cytosol	72.1	71.99
Bra004727.1-P	Field mustard	cytosol	61.5	71.13
Bra000277.1-P	Field mustard	cytosol	71.45	67.91
CDX83515	Canola	cytosol	71.45	67.91
CDY60195	Canola	cytosol	72.76	67.88
CDY42817	Canola	cytosol	70.96	67.76
PGSC0003DMT400018188	Potato	cytosol	65.58	66.67
PGSC0003DMT400054750	Potato	cytosol	64.44	66.61
Zm00001d011426_P002	Maize	cytosol	71.29	66.01
PGSC0003DMT400011138	Potato	cytosol	60.69	65.84
GSMUA_AchrUn_...	Banana	nucleus	66.07	64.9
Os06t0367900-01	Rice	cytosol	59.87	64.39
PGSC0003DMT400015265	Potato	cytosol	49.92	59.77
PGSC0003DMT400078323	Potato	cytosol	49.43	59.3
PGSC0003DMT400006281	Potato	cytosol	54.0	57.57
PGSC0003DMT400074096	Potato	cytosol	54.98	55.7
PGSC0003DMT400000192	Potato	cytosol	27.73	45.58
PGSC0003DMT400077272	Potato	cytosol	27.24	44.77
PGSC0003DMT400065261	Potato	cytosol	26.92	44.35
PGSC0003DMT400031773	Potato	cytosol	27.41	44.33
PGSC0003DMT400055751	Potato	cytosol	26.75	43.62
PGSC0003DMT400009491	Potato	cytosol	26.1	43.01
PGSC0003DMT400009066	Potato	cytosol	25.45	42.16

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	EntrezGene:102599920	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:GO:0000165
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1BGJ9	InterPro:MAP_kinase_CS	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400017345	PGSC:PGSC0003DMG400017345
EnsemblPlants:PGSC0003DMT400044709	ScanProsite:PS00107	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF195
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0002967882	RefSeq:XP_006348950.1
SEG:seg	:	:	:	:	:

Description

Big map kinase/bmk [Source:PGSC_GENE;Acc:PGSC0003DMG400017345]

Coordinates

chr7:-:51103363..51109083

Molecular Weight (calculated)

69713.7 Da

IEP (calculated)

9.551

GRAVY (calculated)

-0.510

Length

613 amino acids

Sequence
(BLAST)

001: MQPDHRKKSS AEMDFFSEYG DANRYKIQEV IGKGSYGVVC SAIDTHTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRRDFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLTGKPL FPGKNVVHQL DLMTDLLGTP SMDTISRVRN DKARRYLTSM RKKPPVSFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KSEREPSCKS ISKMEFEFER RRVTKEDLRE LIFREILEYH PQLRKDYLNG VERTNFLYPS AVDQFRKQFA HLEENGANGV
401: PVVPMDRKHV SLPRSTVVHS NPNPLKEQPI AANMRDRQNG EESCSRNCRD SEGLASSLTR TLQAQPRNAL AAKPGKVVGP GLAYDSGNRE KYDPRPQVRN
501: AVVYNYDRSG VVKQERSVET ERGMNSHSKP MAPCGMAAKL APDIAINIDS NPFYMMRAGV TKPDRVDDRI TIDTNLLQAK SQYGGIGVAA TAATTGAAHR
601: KVGTVQYGMS RMY

Best Arabidopsis Sequence Match ( AT2G42880.1 )
(BLAST)

001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY

Arabidopsis Description

MPK20Mitogen-activated protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.