Factsheet for PGSC0003DMT400055751

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400000744
PGSC0003DMT400005396
PGSC0003DMT400014637
PGSC0003DMT400030388
PGSC0003DMT400055751
PGSC0003DMT400067237
PGSC0003DMT400073800
PGSC0003DMT400076377	nucleus
PGSC0003DMT400092612
PGSC0003DMT400097260	nucleus
PGSC0003DMT400097756

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01370.1	PGSC0003DMT400076377	AT1G28280.1	24750137
AT4G01370.1	PGSC0003DMT400097756	AT1G78310.1	24750137
AT4G01370.1	PGSC0003DMT400005396	AT2G35230.1	24750137
AT4G01370.1	PGSC0003DMT400092612	AT2G35230.1	24750137
AT4G01370.1	PGSC0003DMT400030388	AT2G38470.1	18650934
AT4G01370.1	PGSC0003DMT400073800	AT3G18690.1	15990873
AT4G01370.1	PGSC0003DMT400073800	AT3G18690.1	21203436
AT4G01370.1	PGSC0003DMT400073800	AT3G18690.1	23115249
AT4G01370.1	PGSC0003DMT400073800	AT3G18690.1	24750137
AT4G01370.1	PGSC0003DMT400055751	AT4G01370.1	19513235
AT4G01370.1	PGSC0003DMT400067237	AT4G08480.1	22643122
AT4G01370.1	PGSC0003DMT400000744	AT4G29810.2	23115249
AT4G01370.1	PGSC0003DMT400097260	AT5G53830.1	24750137
AT4G01370.1	PGSC0003DMT400014637	AT5G56580.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g049970.2.1	Tomato	cytosol	99.73	99.73
PGSC0003DMT400000192	Potato	cytosol	84.04	84.72
AT1G01560.2	Thale cress	cytosol	80.32	81.84
AT4G01370.1	Thale cress	cytosol	81.38	81.38
CDX74352	Canola	cytosol	79.79	80.43
CDX91889	Canola	cytosol	79.79	80.43
Bra000955.1-P	Field mustard	cytosol	79.52	80.16
Os10t0533600-01	Rice	plasma membrane	78.46	78.46
Zm00001d047349_P001	Maize	extracellular	76.86	77.69
EER94589	Sorghum	cytosol	77.66	77.45
PGSC0003DMT400031773	Potato	cytosol	77.93	77.31
TraesCS1D01G192200.1	Wheat	cytosol	75.53	75.53
TraesCS1B01G192600.3	Wheat	cytosol	75.53	75.53
TraesCS1A01G184500.1	Wheat	cytosol	75.53	75.33
HORVU1Hr1G049500.2	Barley	cytosol	75.27	75.07
PGSC0003DMT400065261	Potato	cytosol	69.68	70.43
PGSC0003DMT400077272	Potato	cytosol	60.37	60.86
PGSC0003DMT400009491	Potato	cytosol	52.93	53.49
PGSC0003DMT400009066	Potato	cytosol	52.39	53.24
PGSC0003DMT400078323	Potato	cytosol	41.49	30.53
PGSC0003DMT400015265	Potato	cytosol	41.22	30.27
PGSC0003DMT400006281	Potato	cytosol	44.15	28.87
PGSC0003DMT400011138	Potato	cytosol	42.82	28.5
PGSC0003DMT400054750	Potato	cytosol	43.09	27.32
PGSC0003DMT400044709	Potato	cytosol	43.62	26.75
PGSC0003DMT400018188	Potato	cytosol	42.82	26.7
PGSC0003DMT400074096	Potato	cytosol	42.82	26.61

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	MapMan:13.4.4.1.4	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:GO:0000165
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1BYF9	InterPro:MAP_kinase_CS	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400021649	PGSC:PGSC0003DMG400021649
EnsemblPlants:PGSC0003DMT400055751	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS01351	PFscan:PS50011
PANTHER:PTHR24055	PANTHER:PTHR24055:SF227	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294CD1D	:	:	:	:

Description

Mitogen-activated protein kinase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400021649]

Coordinates

chr5:+:44000845..44007763

Molecular Weight (calculated)

43058.6 Da

IEP (calculated)

7.242

GRAVY (calculated)

-0.389

Length

376 amino acids

Sequence
(BLAST)

001: MSLDSSSADH GGHSNIRGVP THGGRYVQYN VHGSLFEVSR KYVPPIRPIG RGANGMVCAA VNSETREEVA IKKIGNAFDN VIDAKRTLRE IKLLSHMDHE
101: NVIAIKDVIR PPQKKNFNDV YIVYELMDTD LHQIIHSSQQ LTDEHCRHFL YQILRGLKYI HSANILHRDL KPSNLLVNAK CDLKIGDFGL ARTTTETDFM
201: MEYCVTRWYR APELLLNCSE YTSAIDIWSV GCILGEILTR QPLFPGRDYV HQLRLITELI GSPDDASLGF LRSNNARRYV RQLPRYPRQQ FAARFPNSSP
301: RAVDLLEKML IFDPSRRITA DEALCHPYLA PLHEINEEPV CPRPFSLDFE QPSLTEDNIK ELIWREAAKF NPDPTH

Best Arabidopsis Sequence Match ( AT4G01370.1 )
(BLAST)

001: MSAESCFGSS GDQSSSKGVA THGGSYVQYN VYGNLFEVSR KYVPPLRPIG RGAYGIVCAA TNSETGEEVA IKKIGNAFDN IIDAKRTLRE IKLLKHMDHE
101: NVIAVKDIIK PPQRENFNDV YIVYELMDTD LHQIIRSNQP LTDDHCRFFL YQLLRGLKYV HSANVLHRDL KPSNLLLNAN CDLKLGDFGL ARTKSETDFM
201: TEYVVTRWYR APELLLNCSE YTAAIDIWSV GCILGETMTR EPLFPGKDYV HQLRLITELI GSPDDSSLGF LRSDNARRYV RQLPQYPRQN FAARFPNMSA
301: GAVDLLEKML VFDPSRRITV DEALCHPYLA PLHDINEEPV CVRPFNFDFE QPTLTEENIK ELIYRETVKF NPQDSV

Arabidopsis Description

MPK4Mitogen-activated protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.