Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 4
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
PGSC0003DMT400055751 | |
PGSC0003DMT400073800 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc09g014990.2.1 | Tomato | nucleus | 92.4 | 71.27 |
PGSC0003DMT400046529 | Potato | endoplasmic reticulum, vacuole | 17.16 | 43.48 |
VIT_08s0058g00690.t01 | Wine grape | nucleus | 52.21 | 38.59 |
PGSC0003DMT400043204 | Potato | nucleus | 49.51 | 37.83 |
Bra005104.1-P | Field mustard | nucleus | 40.93 | 36.54 |
CDX91470 | Canola | nucleus, plastid | 41.91 | 35.92 |
Bra000064.1-P | Field mustard | nucleus | 41.42 | 35.73 |
CDY07729 | Canola | nucleus | 41.42 | 35.73 |
CDY65564 | Canola | nucleus, plastid | 41.18 | 35.67 |
Bra017117.1-P | Field mustard | nucleus | 39.46 | 34.77 |
CDY14459 | Canola | nucleus, plastid | 41.67 | 34.69 |
CDY69941 | Canola | nucleus, plastid | 40.44 | 34.59 |
CDY18383 | Canola | nucleus, plastid | 40.69 | 34.51 |
AT2G38470.1 | Thale cress | nucleus, plastid | 43.38 | 34.1 |
CDY48650 | Canola | nucleus, plastid | 32.6 | 30.02 |
PGSC0003DMT400003637 | Potato | nucleus | 27.45 | 24.83 |
PGSC0003DMT400072836 | Potato | nucleus | 30.88 | 24.8 |
PGSC0003DMT400014220 | Potato | nucleus | 28.68 | 22.67 |
PGSC0003DMT400076670 | Potato | nucleus | 33.33 | 22.26 |
PGSC0003DMT400057409 | Potato | nucleus | 32.11 | 21.98 |
PGSC0003DMT400060042 | Potato | nucleus | 23.77 | 21.23 |
PGSC0003DMT400015754 | Potato | nucleus | 21.57 | 20.85 |
PGSC0003DMT400028530 | Potato | nucleus | 23.77 | 20.77 |
PGSC0003DMT400056952 | Potato | nucleus | 37.99 | 20.72 |
PGSC0003DMT400074158 | Potato | nucleus | 21.57 | 16.03 |
PGSC0003DMT400029328 | Potato | nucleus | 26.96 | 15.78 |
PGSC0003DMT400029069 | Potato | mitochondrion | 0.49 | 1.64 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009408 | GO:GO:0009409 | GO:GO:0009414 | GO:GO:0009605 |
GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010120 |
GO:GO:0010200 | GO:GO:0010508 | GO:GO:0019748 | GO:GO:0034605 | GO:GO:0042742 | GO:GO:0043565 |
GO:GO:0044212 | GO:GO:0050832 | GO:GO:0070370 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1AU56 |
PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400011633 | PGSC:PGSC0003DMG400011633 | EnsemblPlants:PGSC0003DMT400030388 | PFscan:PS50811 | PANTHER:PTHR31221 |
PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00029537A3 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
SEG:seg | : | : | : | : | : |
Description
WRKY-type transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400011633]
Coordinates
chr9:-:11719670..11722785
Molecular Weight (calculated)
45476.9 Da
IEP (calculated)
7.529
GRAVY (calculated)
-0.916
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGGNMNT FMNSFNSFSS SQFMTSSFSD LLSDNNDNNN NNNKNWGFSD DRIKSFPMIN SSSSPASPSS YLAFPHSLSP SMLLDSPVLF NNSNTLSSPT
101: TGSFGNLNSK EGNSRSSEFS FQSRPATSSS IFQSSAPRNS LEDLMTRQQQ TTEFSTAKTG VKSEVAPIQS FSQENMPNNP APVHYCQPSQ YVREQKAEDG
201: YNWRKYGQKQ VKGSENPRSY YKCTFPNCPT KKKVERNLDG HITEIVYKGS HNHPKPQSTR RSSSQSVQNL AYSNLDVTNQ PNAFHENGQR DSFAVTDNSS
301: ASFGDEDVDQ GSPISKSGEN EPEAKRWKGD NENEVISSAS RTVREPRIVV QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR LAIPTPYNIS CFSHYYILLC
401: KELNDQLA
101: TGSFGNLNSK EGNSRSSEFS FQSRPATSSS IFQSSAPRNS LEDLMTRQQQ TTEFSTAKTG VKSEVAPIQS FSQENMPNNP APVHYCQPSQ YVREQKAEDG
201: YNWRKYGQKQ VKGSENPRSY YKCTFPNCPT KKKVERNLDG HITEIVYKGS HNHPKPQSTR RSSSQSVQNL AYSNLDVTNQ PNAFHENGQR DSFAVTDNSS
301: ASFGDEDVDQ GSPISKSGEN EPEAKRWKGD NENEVISSAS RTVREPRIVV QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR LAIPTPYNIS CFSHYYILLC
401: KELNDQLA
001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP
Arabidopsis Description
WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.