Factsheet for Bra005104.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000955.1-P
Bra001716.1-P
Bra003509.1-P
Bra007700.1-P
Bra014393.1-P
Bra022345.1-P
Bra037569.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38470.1	Bra001716.1-P	AT3G18690.1	15990873
AT2G38470.1	Bra022345.1-P	AT3G18690.1	15990873
AT2G38470.1	Bra037569.1-P	AT3G18690.1	15990873
AT2G38470.1	Bra001716.1-P	AT3G18690.1	18650934
AT2G38470.1	Bra022345.1-P	AT3G18690.1	18650934
AT2G38470.1	Bra037569.1-P	AT3G18690.1	18650934
AT2G38470.1	Bra001716.1-P	AT3G18690.1	21203436
AT2G38470.1	Bra022345.1-P	AT3G18690.1	21203436
AT2G38470.1	Bra037569.1-P	AT3G18690.1	21203436
AT2G38470.1	Bra003509.1-P	AT3G62770.1	21395886
AT2G38470.1	Bra007700.1-P	AT3G62770.1	21395886
AT2G38470.1	Bra014393.1-P	AT3G62770.1	21395886
AT2G38470.1	Bra000955.1-P	AT4G01370.1	18650934

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91470	Canola	nucleus, plastid	96.94	93.07
CDY65564	Canola	nucleus, plastid	94.97	92.14
Bra017117.1-P	Field mustard	nucleus	86.0	84.88
Bra000064.1-P	Field mustard	nucleus	82.28	79.49
CDY48650	Canola	nucleus, plastid	73.74	76.07
AT2G38470.1	Thale cress	nucleus, plastid	84.25	74.18
Bra028707.1-P	Field mustard	nucleus	33.26	47.65
Bra021623.1-P	Field mustard	nucleus	34.35	44.86
GSMUA_Achr3P09940_001	Banana	nucleus	35.67	44.54
Bra018325.1-P	Field mustard	nucleus	36.32	44.5
Solyc09g014990.2.1	Tomato	nucleus	50.55	43.67
KRH17125	Soybean	nucleus	54.27	43.13
VIT_08s0058g00690.t01	Wine grape	nucleus	52.08	43.12
KRH72765	Soybean	nucleus	54.7	43.1
Bra022786.1-P	Field mustard	nucleus	35.45	42.86
GSMUA_Achr11P...	Banana	nucleus	42.67	41.85
KRG98195	Soybean	nucleus	49.23	41.51
KRH30155	Soybean	nucleus	49.45	41.24
GSMUA_Achr6P32720_001	Banana	nucleus	41.14	41.23
PGSC0003DMT400030388	Potato	nucleus	36.54	40.93
Os01t0826400-01	Rice	extracellular	48.36	39.82
TraesCS1A01G298600.1	Wheat	nucleus, plastid	43.54	39.41
KXG33637	Sorghum	nucleus	47.92	39.39
TraesCS3D01G341100.1	Wheat	nucleus	47.92	39.04
TraesCS3B01G379200.1	Wheat	nucleus	47.7	39.0
TraesCS3A01G347500.1	Wheat	nucleus	47.92	38.97
Zm00001d043025_P001	Maize	nucleus	47.26	38.92
TraesCS1D01G292700.1	Wheat	nucleus, plastid	43.11	38.86
TraesCS1B01G308200.1	Wheat	nucleus, plastid	43.11	38.7
HORVU1Hr1G070250.2	Barley	nucleus, plastid	43.11	38.48
Os05t0474800-01	Rice	nucleus	45.73	36.54
HORVU3Hr1G088200.4	Barley	nucleus, plastid	47.7	36.39
Zm00001d038451_P001	Maize	nucleus	43.98	36.09
Zm00001d012482_P001	Maize	nucleus	46.39	35.75
GSMUA_Achr8P01790_001	Banana	nucleus	42.67	34.21
Bra016716.1-P	Field mustard	nucleus	34.35	33.76
Bra026869.1-P	Field mustard	nucleus	34.57	32.92
Bra019697.1-P	Field mustard	nucleus	35.45	32.86
Bra028939.1-P	Field mustard	nucleus	31.95	32.52
Bra026554.1-P	Field mustard	nucleus	33.48	32.21
OQU78174	Sorghum	nucleus	45.08	31.74
Bra024780.1-P	Field mustard	nucleus	33.7	31.69
Bra028971.1-P	Field mustard	nucleus	32.6	30.72
Bra019105.1-P	Field mustard	nucleus	35.01	30.25
Bra026414.1-P	Field mustard	nucleus	34.57	29.53
Bra023112.1-P	Field mustard	nucleus	26.7	29.05
Bra026438.1-P	Field mustard	nucleus	33.7	28.84
Bra010431.1-P	Field mustard	nucleus	33.26	27.89
Bra005210.1-P	Field mustard	nucleus	24.73	27.63
Bra002828.1-P	Field mustard	nucleus	39.61	26.89
Bra013187.1-P	Field mustard	nucleus	24.95	25.5
Bra030848.1-P	Field mustard	nucleus	10.07	22.66
Bra010266.1-P	Field mustard	nucleus	21.23	21.23
Bra037106.1-P	Field mustard	nucleus	19.69	20.83
Bra019095.1-P	Field mustard	nucleus	33.48	20.29
Bra030847.1-P	Field mustard	nucleus	18.16	18.57
Bra024035.1-P	Field mustard	nucleus	21.88	16.98
Bra038006.1-P	Field mustard	nucleus	17.72	12.39

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	EnsemblPlantsGene:Bra005104	EnsemblPlants:Bra005104.1	EnsemblPlants:Bra005104.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:M4CLL7	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00025476B1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

AT2G38470 (E=3e-093) WRKY33, ATWRKY33 | WRKY33; transcription factor

Coordinates

chrA05:-:3439967..3443129

Molecular Weight (calculated)

50265.2 Da

IEP (calculated)

7.919

GRAVY (calculated)

-0.941

Length

457 amino acids

Sequence
(BLAST)

001: MNGSANWSGI RSSAASLEDL EIPPKFRSFA PSSISISPSL VSPSTCFSPS IFLDSPAFVA SSANVLASPT TGALLTYENN QKSINEEEKT KKNNNNVNFF
101: DFSFQTQSSG VSAPTRTTTN SSVLQSQETR PHSNTHHQAV SYNGREQRKG EDGYNWRKYG QKQVKGSENP RSYYKCTFPN CPTKKKVETS LEGQITEIVY
201: KGSHNHPKPQ STRRSSSSSS TFHSAVFDHH GDHSDSFVIQ QDDNNTTSGS LGDDELSVMS RGEEEDCGSE PEAKRWKGEN ETNGGNGNGS KTVREPRIVV
301: QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTTNGC PVRKHVERAS HDMRAVITTY EGKHNHDVPA ARGSGYTTNR LAQEPSSAPI RPNAIAGHSN
401: YTTSQAPYTL QMLHQNNNTS AGSIGYAMNN NNFLGGGFSR AKEEPNDDSS FFDSFLS

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.