Factsheet for Bra010431.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14304	Canola	nucleus	98.35	97.99
CDX97359	Canola	nucleus	95.23	96.65
Bra026414.1-P	Field mustard	nucleus	80.73	82.24
AT4G26640.2	Thale cress	nucleus	84.04	82.23
Bra028971.1-P	Field mustard	nucleus	56.7	63.71
Bra019095.1-P	Field mustard	nucleus	77.43	55.97
VIT_19s0090g01720.t01	Wine grape	nucleus	53.21	49.15
Solyc12g014610.1.1	Tomato	nucleus	49.17	43.86
PGSC0003DMT400076670	Potato	nucleus	48.81	43.54
GSMUA_Achr7P25840_001	Banana	nucleus	19.63	43.32
Solyc07g065260.2.1	Tomato	nucleus	46.79	42.79
PGSC0003DMT400057409	Potato	nucleus	46.79	42.79
Bra028707.1-P	Field mustard	nucleus	24.59	42.01
GSMUA_Achr4P13970_001	Banana	nucleus	38.72	41.13
KRH49522	Soybean	extracellular, plasma membrane	18.72	40.48
Os07t0583700-01	Rice	nucleus	43.3	38.19
Zm00001d021947_P002	Maize	nucleus	42.39	37.68
KXG36569	Sorghum	nucleus	41.83	37.32
GSMUA_Achr3P29850_001	Banana	nucleus	39.27	37.15
Bra021623.1-P	Field mustard	nucleus	23.85	37.14
Zm00001d006702_P001	Maize	nucleus	41.47	37.05
Bra018325.1-P	Field mustard	nucleus	25.32	37.0
Bra022786.1-P	Field mustard	nucleus	23.67	34.13
Bra016716.1-P	Field mustard	nucleus	28.44	33.33
Bra005104.1-P	Field mustard	nucleus	27.89	33.26
Bra026554.1-P	Field mustard	nucleus	28.62	32.84
Bra017117.1-P	Field mustard	nucleus	27.71	32.61
Bra026869.1-P	Field mustard	nucleus	28.44	32.29
Bra019697.1-P	Field mustard	nucleus	29.17	32.25
Bra028939.1-P	Field mustard	nucleus	26.42	32.07
Bra000064.1-P	Field mustard	nucleus	27.16	31.29
Bra024780.1-P	Field mustard	nucleus	27.89	31.28
Bra026438.1-P	Field mustard	nucleus	29.54	30.15
Bra019105.1-P	Field mustard	nucleus	28.81	29.68
HORVU2Hr1G036320.1	Barley	nucleus	32.66	28.94
TraesCS2A01G189700.1	Wheat	nucleus	32.48	28.92
TraesCS2B01G217400.2	Wheat	nucleus	32.48	28.83
TraesCS2D01G198100.4	Wheat	nucleus	32.29	27.59
Bra002828.1-P	Field mustard	nucleus	32.29	26.15
Bra030848.1-P	Field mustard	nucleus	9.72	26.11
Bra023112.1-P	Field mustard	nucleus	20.0	25.95
Bra013187.1-P	Field mustard	nucleus	21.1	25.73
Bra005210.1-P	Field mustard	nucleus	19.27	25.67
Bra010266.1-P	Field mustard	nucleus	17.61	21.01
Bra030847.1-P	Field mustard	nucleus	15.96	19.46
Bra037106.1-P	Field mustard	nucleus	14.13	17.82
Bra024035.1-P	Field mustard	nucleus	17.25	15.96
Bra038006.1-P	Field mustard	nucleus	14.86	12.39

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra010431	EnsemblPlants:Bra010431.1	EnsemblPlants:Bra010431.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4D1T1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000254585E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT4G26640 (E=8e-240) WRKY20, AtWRKY20 | WRKY20; transcription factor

Coordinates

chrA08:+:14489817..14492885

Molecular Weight (calculated)

59955.0 Da

IEP (calculated)

7.252

GRAVY (calculated)

-0.997

Length

545 amino acids

Sequence
(BLAST)

001: MDPPQANIDR EELQVDCSAT VDPTARHNSA GGGGGARYKL MSPAMLPISR STTNITIPPG LSPTSFLESP VFISNIKPEP SPTTGSLFKP RPVHVSSSSY
101: TGRAFHQNTF TEHNSSEFEF RPPASNMVYS ELDKHKREPP VQFQDQGHGS SHSPEAAASS SEPSRPTPPV QTPPTSSDIP AGSDQEESVQ TSQNESRGSA
201: PPTVLADDGY NWRKYGQKHV KGSEFPRSYY KCTHPNCEVK KLFETSHDGR ITDIIYKGTH DHPKPQPGRR NSGGVGMAAQ EERVGKYPPM TRRDGEKGVY
301: SLSQAIEQTG NPEVASTNND GGDVAASNRN KDDPEDDDPY TKRRRLDGNM EITPLVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK
401: CTAPGCPVRK HVERASHDPK AVITTYEGKH NHDVPTSKSG SSNHHEIQPR FRPPDETDTI SLNLGVGISS NGPNENQQLV NQTHPNGVGF RFVHAAPVST
501: YYASMNQYGP RETQSETQNG DISSLNHSSS YPYPHNNIGR IQTGP

Best Arabidopsis Sequence Match ( AT4G26640.2 )
(BLAST)

001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP

Arabidopsis Description

WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.