Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14304 | Canola | nucleus | 97.39 | 95.61 |
| Bra010431.1-P | Field mustard | nucleus | 96.65 | 95.23 |
| CDX89317 | Canola | nucleus | 82.5 | 82.96 |
| CDX92808 | Canola | nucleus | 80.26 | 82.25 |
| CDX94303 | Canola | nucleus | 81.19 | 81.95 |
| AT4G26640.2 | Thale cress | nucleus | 84.17 | 81.15 |
| CDY46692 | Canola | nucleus | 78.77 | 80.57 |
| CDY70490 | Canola | nucleus | 59.03 | 61.2 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 53.63 | 48.81 |
| Solyc12g014610.1.1 | Tomato | nucleus | 50.09 | 44.03 |
| PGSC0003DMT400076670 | Potato | nucleus | 49.53 | 43.54 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 19.74 | 42.91 |
| Solyc07g065260.2.1 | Tomato | nucleus | 47.49 | 42.79 |
| PGSC0003DMT400057409 | Potato | nucleus | 47.49 | 42.79 |
| CDY05016 | Canola | nucleus | 24.77 | 41.69 |
| CDY14055 | Canola | nucleus | 24.77 | 41.69 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 39.11 | 40.94 |
| KRH49522 | Soybean | extracellular, plasma membrane | 18.99 | 40.48 |
| Os07t0583700-01 | Rice | nucleus | 43.58 | 37.86 |
| Zm00001d021947_P002 | Maize | nucleus | 42.64 | 37.36 |
| KXG36569 | Sorghum | nucleus | 42.09 | 36.99 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 39.66 | 36.98 |
| Zm00001d006702_P001 | Maize | nucleus | 41.9 | 36.89 |
| CDY29685 | Canola | nucleus | 24.02 | 36.86 |
| CDX97834 | Canola | nucleus | 24.58 | 36.57 |
| CDY10720 | Canola | nucleus | 25.33 | 36.46 |
| CDX84848 | Canola | nucleus | 24.02 | 34.13 |
| CDY36419 | Canola | nucleus | 28.86 | 34.07 |
| CDX91470 | Canola | nucleus, plastid | 30.17 | 34.03 |
| CDY24017 | Canola | nucleus | 23.84 | 33.86 |
| CDY65564 | Canola | nucleus, plastid | 29.61 | 33.76 |
| CDX98138 | Canola | nucleus | 28.68 | 33.7 |
| CDY69941 | Canola | nucleus, plastid | 29.61 | 33.33 |
| CDY53941 | Canola | nucleus | 27.19 | 33.18 |
| CDX96873 | Canola | nucleus | 28.68 | 33.05 |
| CDY18383 | Canola | nucleus, plastid | 29.42 | 32.85 |
| CDY62213 | Canola | nucleus | 28.12 | 32.54 |
| CDY02051 | Canola | nucleus | 16.76 | 32.49 |
| CDY33788 | Canola | nucleus | 26.63 | 32.35 |
| CDY07729 | Canola | nucleus | 28.31 | 32.14 |
| CDY72350 | Canola | nucleus | 8.57 | 31.72 |
| CDY16122 | Canola | nucleus | 26.26 | 31.47 |
| CDY14459 | Canola | nucleus, plastid | 28.68 | 31.43 |
| CDY37191 | Canola | nucleus | 28.31 | 31.28 |
| CDY45169 | Canola | nucleus | 28.12 | 31.07 |
| CDX74281 | Canola | nucleus | 26.07 | 31.04 |
| CDY03003 | Canola | nucleus | 27.75 | 30.47 |
| CDX94335 | Canola | nucleus | 28.86 | 30.16 |
| CDX89336 | Canola | nucleus | 29.98 | 30.15 |
| CDY69527 | Canola | nucleus | 30.17 | 29.83 |
| CDY42736 | Canola | nucleus | 29.24 | 29.68 |
| CDX93073 | Canola | nucleus | 20.11 | 29.35 |
| CDY48650 | Canola | nucleus, plastid | 24.21 | 29.35 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 32.96 | 28.92 |
| CDY11947 | Canola | nucleus | 30.91 | 28.92 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 32.96 | 28.83 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 32.96 | 28.78 |
| CDY36788 | Canola | nucleus | 33.15 | 28.53 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 32.77 | 27.59 |
| CDY62292 | Canola | nucleus | 10.61 | 27.4 |
| CDY49388 | Canola | nucleus | 33.15 | 26.53 |
| CDX74976 | Canola | nucleus | 19.55 | 26.38 |
| CDY50038 | Canola | nucleus | 21.04 | 25.92 |
| CDX91348 | Canola | nucleus | 19.18 | 25.62 |
| CDY62293 | Canola | nucleus | 9.5 | 25.12 |
| CDY36463 | Canola | nucleus | 17.32 | 23.31 |
| CDY32799 | Canola | nucleus | 25.33 | 22.63 |
| CDY23265 | Canola | nucleus | 17.69 | 20.79 |
| CDY47543 | Canola | nucleus | 10.8 | 20.49 |
| CDX79729 | Canola | nucleus | 11.92 | 19.88 |
| CDY46768 | Canola | nucleus | 11.92 | 19.81 |
| CDY46769 | Canola | nucleus | 11.92 | 19.81 |
| CDY10548 | Canola | nucleus | 15.64 | 19.49 |
| CDY47546 | Canola | nucleus | 14.15 | 19.34 |
| CDY59057 | Canola | nucleus | 15.46 | 18.57 |
| CDY13396 | Canola | nucleus | 17.69 | 17.89 |
| CDY26094 | Canola | nucleus | 13.22 | 17.07 |
| CDY08253 | Canola | nucleus | 13.22 | 17.07 |
| CDY52777 | Canola | nucleus, plastid | 5.03 | 15.79 |
| CDY67588 | Canola | nucleus | 14.15 | 14.73 |
| CDY54360 | Canola | nucleus | 14.71 | 14.21 |
| CDX72277 | Canola | nucleus | 17.69 | 12.96 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078E9E4 | EnsemblPlants:CDX97359 | ProteinID:CDX97359 | ProteinID:CDX97359.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00104454001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDB81A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g12240D
Coordinates
chrLK031899:-:12296..15718
Molecular Weight (calculated)
58958.8 Da
IEP (calculated)
7.126
GRAVY (calculated)
-0.971
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLPQANNDR EELQVDCSAT VDPTARHNSA GGGGGGGGAR YKLMSPAMLP ISRSTTNITI PSGLSPTSFL ESPVFISNIK PEPSPTTGSL FKPRPVHVSS
101: SSYTGRAFHQ NTFTEHKSSE FEFRPPASNM VYAELDKHKR EPPVQFQGQG HGSSHSPEAT ASSSEPSRPT PPVQTPPTSS DIPAGSDQEE SVQTSQNESR
201: GSAPPTVLAD DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC EVKKLFETSH DGRITDIIYK GTHDHPKPQP GRRNSGGVGM VAQEERVEKG VYNLSQAIEQ
301: TGNPEVATTT NDGGDVAASN RNKDDPEDDD PYTKRRRLDG NMEITPLVKP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTAPGCPV
401: RKHVERASHD PKAVITTYEG KHNHDVPTSK SGSSNHHEIQ PRFRPPEETD TISLNLGVGI SSNGPNENQQ LLSQTHPNGV GFRFVHAAPV STYYASMNQY
501: GPRETQSETQ NDDISSLNHS SSYPYPHNNI GRIQTGP
101: SSYTGRAFHQ NTFTEHKSSE FEFRPPASNM VYAELDKHKR EPPVQFQGQG HGSSHSPEAT ASSSEPSRPT PPVQTPPTSS DIPAGSDQEE SVQTSQNESR
201: GSAPPTVLAD DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC EVKKLFETSH DGRITDIIYK GTHDHPKPQP GRRNSGGVGM VAQEERVEKG VYNLSQAIEQ
301: TGNPEVATTT NDGGDVAASN RNKDDPEDDD PYTKRRRLDG NMEITPLVKP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTAPGCPV
401: RKHVERASHD PKAVITTYEG KHNHDVPTSK SGSSNHHEIQ PRFRPPEETD TISLNLGVGI SSNGPNENQQ LLSQTHPNGV GFRFVHAAPV STYYASMNQY
501: GPRETQSETQ NDDISSLNHS SSYPYPHNNI GRIQTGP
001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.