Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028971.1-P | Field mustard | nucleus | 74.71 | 79.79 |
| CDX89317 | Canola | nucleus | 62.36 | 60.49 |
| CDX94303 | Canola | nucleus | 61.97 | 60.34 |
| CDX92808 | Canola | nucleus | 60.81 | 60.11 |
| CDX97359 | Canola | nucleus | 61.2 | 59.03 |
| CDY14304 | Canola | nucleus | 61.97 | 58.68 |
| CDY46692 | Canola | nucleus | 58.11 | 57.33 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 51.93 | 45.59 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 21.04 | 44.13 |
| Solyc12g014610.1.1 | Tomato | nucleus | 50.58 | 42.88 |
| CDY14055 | Canola | nucleus | 26.25 | 42.63 |
| CDY05016 | Canola | nucleus | 26.25 | 42.63 |
| PGSC0003DMT400076670 | Potato | nucleus | 50.19 | 42.55 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 41.51 | 41.91 |
| PGSC0003DMT400057409 | Potato | nucleus | 47.88 | 41.61 |
| Solyc07g065260.2.1 | Tomato | nucleus | 47.68 | 41.44 |
| KRH49522 | Soybean | extracellular, plasma membrane | 19.3 | 39.68 |
| CDY29685 | Canola | nucleus | 25.87 | 38.29 |
| CDX97834 | Canola | nucleus | 26.64 | 38.23 |
| CDY10720 | Canola | nucleus | 27.41 | 38.07 |
| KXG36569 | Sorghum | nucleus | 44.4 | 37.64 |
| Os07t0583700-01 | Rice | nucleus | 44.79 | 37.54 |
| Zm00001d021947_P002 | Maize | nucleus | 44.21 | 37.36 |
| Zm00001d006702_P001 | Maize | nucleus | 43.63 | 37.05 |
| CDY24017 | Canola | nucleus | 26.45 | 36.24 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 40.15 | 36.11 |
| CDX84848 | Canola | nucleus | 26.25 | 35.98 |
| CDY02051 | Canola | nucleus | 18.53 | 34.66 |
| CDX91470 | Canola | nucleus, plastid | 31.27 | 34.03 |
| CDY65564 | Canola | nucleus, plastid | 30.89 | 33.97 |
| CDY69941 | Canola | nucleus, plastid | 31.08 | 33.75 |
| CDX98138 | Canola | nucleus | 29.54 | 33.48 |
| CDY18383 | Canola | nucleus, plastid | 31.08 | 33.47 |
| CDY53941 | Canola | nucleus | 28.38 | 33.41 |
| CDY36419 | Canola | nucleus | 29.34 | 33.41 |
| CDY07729 | Canola | nucleus | 30.31 | 33.19 |
| CDX96873 | Canola | nucleus | 29.54 | 32.83 |
| CDY62213 | Canola | nucleus | 29.34 | 32.76 |
| CDY72350 | Canola | nucleus | 9.07 | 32.41 |
| CDY14459 | Canola | nucleus, plastid | 30.5 | 32.24 |
| CDY33788 | Canola | nucleus | 27.41 | 32.13 |
| CDX94335 | Canola | nucleus | 31.47 | 31.71 |
| CDY16122 | Canola | nucleus | 27.41 | 31.7 |
| CDX74281 | Canola | nucleus | 27.41 | 31.49 |
| CDY45169 | Canola | nucleus | 29.54 | 31.48 |
| CDY03003 | Canola | nucleus | 29.34 | 31.08 |
| CDX89336 | Canola | nucleus | 31.47 | 30.52 |
| CDY37191 | Canola | nucleus | 28.57 | 30.45 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 35.91 | 30.24 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 35.71 | 30.23 |
| CDY69527 | Canola | nucleus | 31.66 | 30.2 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 35.71 | 30.13 |
| CDY42736 | Canola | nucleus | 30.31 | 29.68 |
| CDX93073 | Canola | nucleus | 21.04 | 29.62 |
| CDY48650 | Canola | nucleus, plastid | 25.29 | 29.57 |
| CDY11947 | Canola | nucleus | 32.43 | 29.27 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 35.52 | 28.84 |
| CDY36788 | Canola | nucleus | 33.78 | 28.04 |
| CDX74976 | Canola | nucleus | 21.43 | 27.89 |
| CDX91348 | Canola | nucleus | 21.43 | 27.61 |
| CDY62292 | Canola | nucleus | 10.81 | 26.92 |
| CDY49388 | Canola | nucleus | 34.56 | 26.68 |
| CDY50038 | Canola | nucleus | 22.39 | 26.61 |
| CDY62293 | Canola | nucleus | 10.23 | 26.11 |
| CDY36463 | Canola | nucleus | 18.15 | 23.56 |
| CDY32799 | Canola | nucleus | 26.25 | 22.63 |
| CDY47543 | Canola | nucleus | 11.97 | 21.91 |
| CDX79729 | Canola | nucleus | 13.51 | 21.74 |
| CDY46768 | Canola | nucleus | 13.51 | 21.67 |
| CDY46769 | Canola | nucleus | 13.51 | 21.67 |
| CDY47546 | Canola | nucleus | 15.83 | 20.87 |
| CDY23265 | Canola | nucleus | 18.34 | 20.79 |
| CDY10548 | Canola | nucleus | 15.44 | 18.56 |
| CDY13396 | Canola | nucleus | 18.92 | 18.46 |
| CDY26094 | Canola | nucleus | 14.48 | 18.03 |
| CDY08253 | Canola | nucleus | 14.48 | 18.03 |
| CDY59057 | Canola | nucleus | 15.25 | 17.67 |
| CDY52777 | Canola | nucleus, plastid | 5.21 | 15.79 |
| CDY67588 | Canola | nucleus | 14.86 | 14.92 |
| CDY54360 | Canola | nucleus | 15.25 | 14.21 |
| CDX72277 | Canola | nucleus | 18.73 | 13.23 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078JVL6 | UniProt:A0A078JVL6 | EnsemblPlants:CDY70490 | ProteinID:CDY70490 |
| ProteinID:CDY70490.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00003886001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE251E | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaCnng68630DBnaCnng68630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVL6]
Coordinates
chrLK042277:+:359..2889
Molecular Weight (calculated)
57415.9 Da
IEP (calculated)
8.101
GRAVY (calculated)
-0.852
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDVSNRVD CSESRRDSSG GGARYKLMSP AKLPISRSTC ITTIPPGLSP TSFLESPVLL SNIKAEPSPT TGSLFKPPQA VHANSSSYTA RTIHQNILDE
101: KNSNESFEFR PPPASTMFYA ELVDKQRSEA HSFKHSPSSA TDAAASSNEI SPQTADQDES RGSAPTILAD DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC
201: EVKKVFERSH EGQITEIVYK GTHDHPKPQP SRRNSGGLVM PAQEERLDKN SPLNGRDEKG SSLYNMSPPV EQIGNDDGGD LGMSNKNNDD VDENDPFSKR
301: RKVDGGMEVT ALVKPIREPR VVVQTLSEVD ILDDGYRWRK YGQKVVRGNP NPRSYYKCTA TGCPVRKHVE RASHDPKAVI TTYEGKHNHD VPMARSNNNS
401: HHELSAPRFR PEESADAVIL DLGVGIASGG PDHTSNEHQQ QQETNIRSEF VHQIQTNGAN GFMFNTIWSL EEGGSQQANQ SNTTTTKRKK KTKGSLLPLF
501: ILILLRLGMK QNFVLCNL
101: KNSNESFEFR PPPASTMFYA ELVDKQRSEA HSFKHSPSSA TDAAASSNEI SPQTADQDES RGSAPTILAD DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC
201: EVKKVFERSH EGQITEIVYK GTHDHPKPQP SRRNSGGLVM PAQEERLDKN SPLNGRDEKG SSLYNMSPPV EQIGNDDGGD LGMSNKNNDD VDENDPFSKR
301: RKVDGGMEVT ALVKPIREPR VVVQTLSEVD ILDDGYRWRK YGQKVVRGNP NPRSYYKCTA TGCPVRKHVE RASHDPKAVI TTYEGKHNHD VPMARSNNNS
401: HHELSAPRFR PEESADAVIL DLGVGIASGG PDHTSNEHQQ QQETNIRSEF VHQIQTNGAN GFMFNTIWSL EEGGSQQANQ SNTTTTKRKK KTKGSLLPLF
501: ILILLRLGMK QNFVLCNL
001: MILLPEPSPT TGSLFKPRPV HISASSSSYT GRGFHQNTFT EQKSSEFEFR PPASNMVYAE LGKIRSEPPV HFQGQGHGSS HSPSSISDAA GSSSELSRPT
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.