Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46692 | Canola | nucleus | 90.84 | 90.67 |
| CDX89317 | Canola | nucleus | 81.87 | 80.34 |
| CDX97359 | Canola | nucleus | 82.25 | 80.26 |
| CDX94303 | Canola | nucleus | 81.3 | 80.08 |
| CDY14304 | Canola | nucleus | 82.25 | 78.79 |
| AT4G26640.2 | Thale cress | nucleus | 82.44 | 77.56 |
| CDY70490 | Canola | nucleus | 60.11 | 60.81 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 55.15 | 48.98 |
| PGSC0003DMT400076670 | Potato | nucleus | 50.19 | 43.04 |
| Solyc12g014610.1.1 | Tomato | nucleus | 50.19 | 43.04 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 20.23 | 42.91 |
| PGSC0003DMT400057409 | Potato | nucleus | 48.47 | 42.62 |
| Solyc07g065260.2.1 | Tomato | nucleus | 48.28 | 42.45 |
| CDY14055 | Canola | nucleus | 25.57 | 42.01 |
| CDY05016 | Canola | nucleus | 25.57 | 42.01 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 40.46 | 41.33 |
| Os07t0583700-01 | Rice | nucleus | 44.27 | 37.54 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 40.84 | 37.15 |
| KRH49522 | Soybean | extracellular, plasma membrane | 17.75 | 36.9 |
| Zm00001d021947_P002 | Maize | nucleus | 42.94 | 36.7 |
| CDY29685 | Canola | nucleus | 24.43 | 36.57 |
| KXG36569 | Sorghum | nucleus | 42.37 | 36.33 |
| CDX97834 | Canola | nucleus | 25.0 | 36.29 |
| Zm00001d006702_P001 | Maize | nucleus | 41.98 | 36.07 |
| CDY10720 | Canola | nucleus | 25.19 | 35.39 |
| CDX84848 | Canola | nucleus | 24.62 | 34.13 |
| CDY24017 | Canola | nucleus | 24.43 | 33.86 |
| CDY36419 | Canola | nucleus | 28.82 | 33.19 |
| CDY65564 | Canola | nucleus, plastid | 29.77 | 33.12 |
| CDX91470 | Canola | nucleus, plastid | 29.96 | 32.98 |
| CDY02051 | Canola | nucleus | 17.37 | 32.85 |
| CDX98138 | Canola | nucleus | 28.63 | 32.82 |
| CDY53941 | Canola | nucleus | 27.29 | 32.5 |
| CDY69941 | Canola | nucleus, plastid | 29.2 | 32.08 |
| CDY18383 | Canola | nucleus, plastid | 29.2 | 31.81 |
| CDY72350 | Canola | nucleus | 8.78 | 31.72 |
| CDY07729 | Canola | nucleus | 28.63 | 31.71 |
| CDY62213 | Canola | nucleus | 27.86 | 31.47 |
| CDY33788 | Canola | nucleus | 26.53 | 31.45 |
| CDX96873 | Canola | nucleus | 27.86 | 31.33 |
| CDY14459 | Canola | nucleus, plastid | 28.82 | 30.82 |
| CDY16122 | Canola | nucleus | 26.14 | 30.58 |
| CDY45169 | Canola | nucleus | 28.05 | 30.25 |
| CDX74281 | Canola | nucleus | 25.95 | 30.16 |
| CDY37191 | Canola | nucleus | 27.67 | 29.84 |
| CDX94335 | Canola | nucleus | 29.2 | 29.77 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 34.73 | 29.74 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 34.73 | 29.64 |
| CDX93073 | Canola | nucleus | 20.8 | 29.62 |
| CDY03003 | Canola | nucleus | 27.48 | 29.45 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 34.54 | 29.43 |
| CDX89336 | Canola | nucleus | 29.77 | 29.21 |
| CDY48650 | Canola | nucleus, plastid | 24.62 | 29.12 |
| CDY11947 | Canola | nucleus | 31.3 | 28.57 |
| CDY69527 | Canola | nucleus | 29.58 | 28.55 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 34.54 | 28.37 |
| CDY42736 | Canola | nucleus | 28.63 | 28.36 |
| CDY36788 | Canola | nucleus | 33.02 | 27.72 |
| CDY62292 | Canola | nucleus | 10.88 | 27.4 |
| CDY50038 | Canola | nucleus | 21.76 | 26.15 |
| CDY49388 | Canola | nucleus | 33.4 | 26.08 |
| CDX74976 | Canola | nucleus | 19.27 | 25.38 |
| CDY62293 | Canola | nucleus | 9.73 | 25.12 |
| CDX91348 | Canola | nucleus | 19.08 | 24.88 |
| CDY36463 | Canola | nucleus | 17.94 | 23.56 |
| CDY32799 | Canola | nucleus | 25.57 | 22.3 |
| CDY23265 | Canola | nucleus | 18.51 | 21.23 |
| CDY47543 | Canola | nucleus | 11.45 | 21.2 |
| CDY47546 | Canola | nucleus | 14.89 | 19.85 |
| CDX79729 | Canola | nucleus | 11.45 | 18.63 |
| CDY46768 | Canola | nucleus | 11.45 | 18.58 |
| CDY46769 | Canola | nucleus | 11.45 | 18.58 |
| CDY10548 | Canola | nucleus | 15.27 | 18.56 |
| CDY13396 | Canola | nucleus | 18.7 | 18.46 |
| CDY59057 | Canola | nucleus | 15.08 | 17.67 |
| CDY26094 | Canola | nucleus | 13.93 | 17.55 |
| CDY08253 | Canola | nucleus | 13.93 | 17.55 |
| CDY52777 | Canola | nucleus, plastid | 4.77 | 14.62 |
| CDY67588 | Canola | nucleus | 13.55 | 13.76 |
| CDY54360 | Canola | nucleus | 14.31 | 13.49 |
| CDX72277 | Canola | nucleus | 18.7 | 13.37 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DZR1 | EnsemblPlants:CDX92808 | ProteinID:CDX92808 | ProteinID:CDX92808.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00154637001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE44B4 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g40660D
Coordinates
chrLK031873:+:893766..896973
Molecular Weight (calculated)
57979.7 Da
IEP (calculated)
7.576
GRAVY (calculated)
-0.998
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPQADNERK EFQVGCTPTA DSTARHNSGG GGGARYKLMS PAKLPISRCN DITIPPGMSP TSFLESPVFI SNIKPEPSPT TGSLVKPRPV HVNSSSYTGR
101: TFHQNTFTEY KSTEFEFRPP ASNMVYAELD KHRSEPPVQG HGSSSHSPSS ISEAAAASST DLSRAAPPVQ TPPTGSDQDE TVQTSQNDSR GSTPPVLADD
201: GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE AKKLFERSHD GKITDIVYKG THDHPKPQPG RRNSAAQEER LEKGVYNLSQ AIEQTGNNNP EVPLTTEDGG
301: EVKDDLEEEE DPFTKRRRLD GSMEITTPLV KPIREPRVVV QTLSEVDILD DGYRWRKYGQ KVVRGNPNPR SYYKCTAPGC PVRKHVERAS HDPKAVITTY
401: EGKHNHDVPT SKSTNHHDIQ PRFRPDETTD TISLNLGVGI SSGGPDNTSN ERNQQLINQT HPNGVGFRFV HAAPVSYYHV SLNSGIHQYG SRETQNETRN
501: GDVSSLNHSS YQYSHNIGRV QSGP
101: TFHQNTFTEY KSTEFEFRPP ASNMVYAELD KHRSEPPVQG HGSSSHSPSS ISEAAAASST DLSRAAPPVQ TPPTGSDQDE TVQTSQNDSR GSTPPVLADD
201: GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE AKKLFERSHD GKITDIVYKG THDHPKPQPG RRNSAAQEER LEKGVYNLSQ AIEQTGNNNP EVPLTTEDGG
301: EVKDDLEEEE DPFTKRRRLD GSMEITTPLV KPIREPRVVV QTLSEVDILD DGYRWRKYGQ KVVRGNPNPR SYYKCTAPGC PVRKHVERAS HDPKAVITTY
401: EGKHNHDVPT SKSTNHHDIQ PRFRPDETTD TISLNLGVGI SSGGPDNTSN ERNQQLINQT HPNGVGFRFV HAAPVSYYHV SLNSGIHQYG SRETQNETRN
501: GDVSSLNHSS YQYSHNIGRV QSGP
001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.