Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030847.1-P | Field mustard | nucleus | 99.55 | 99.55 |
| CDY10548 | Canola | nucleus | 94.41 | 97.91 |
| CDY08253 | Canola | nucleus | 49.89 | 53.61 |
| CDY26094 | Canola | nucleus | 49.66 | 53.37 |
| CDY72350 | Canola | nucleus | 17.23 | 53.1 |
| AT1G55600.1 | Thale cress | nucleus | 54.59 | 50.31 |
| CDY62292 | Canola | nucleus | 23.27 | 50.0 |
| CDY47546 | Canola | nucleus | 42.73 | 48.6 |
| CDY62293 | Canola | nucleus | 20.81 | 45.81 |
| CDY47543 | Canola | nucleus | 28.64 | 45.23 |
| CDY54360 | Canola | nucleus | 51.45 | 41.37 |
| CDY67588 | Canola | nucleus | 46.09 | 39.92 |
| CDY02051 | Canola | nucleus | 16.11 | 25.99 |
| CDY14055 | Canola | nucleus | 14.77 | 20.69 |
| CDY05016 | Canola | nucleus | 14.77 | 20.69 |
| CDY10720 | Canola | nucleus | 17.0 | 20.38 |
| CDY62213 | Canola | nucleus | 20.81 | 20.04 |
| CDY53941 | Canola | nucleus | 19.69 | 20.0 |
| CDY36419 | Canola | nucleus | 20.36 | 20.0 |
| CDY29685 | Canola | nucleus | 15.66 | 20.0 |
| CDX96873 | Canola | nucleus | 20.81 | 19.96 |
| CDX98138 | Canola | nucleus | 20.13 | 19.69 |
| CDX97834 | Canola | nucleus | 15.66 | 19.39 |
| CDX79729 | Canola | nucleus | 13.87 | 19.25 |
| CDY46768 | Canola | nucleus | 13.87 | 19.2 |
| CDY46769 | Canola | nucleus | 13.87 | 19.2 |
| CDY11947 | Canola | nucleus | 24.61 | 19.16 |
| CDY45169 | Canola | nucleus | 20.58 | 18.93 |
| CDY42736 | Canola | nucleus | 22.37 | 18.9 |
| CDY03003 | Canola | nucleus | 20.58 | 18.81 |
| CDY69527 | Canola | nucleus | 22.82 | 18.78 |
| CDY24017 | Canola | nucleus | 15.66 | 18.52 |
| CDY32799 | Canola | nucleus | 24.83 | 18.47 |
| CDX94335 | Canola | nucleus | 21.03 | 18.29 |
| CDX84848 | Canola | nucleus | 15.44 | 18.25 |
| CDY37191 | Canola | nucleus | 19.69 | 18.11 |
| CDX89336 | Canola | nucleus | 21.25 | 17.79 |
| CDY36788 | Canola | nucleus | 24.83 | 17.79 |
| CDY33788 | Canola | nucleus | 17.45 | 17.65 |
| CDX91470 | Canola | nucleus, plastid | 18.57 | 17.44 |
| CDY65564 | Canola | nucleus, plastid | 18.34 | 17.41 |
| CDY49388 | Canola | nucleus | 25.95 | 17.29 |
| CDY69941 | Canola | nucleus, plastid | 18.34 | 17.19 |
| CDY18383 | Canola | nucleus, plastid | 18.34 | 17.05 |
| CDY07729 | Canola | nucleus | 17.9 | 16.91 |
| CDY16122 | Canola | nucleus | 16.78 | 16.74 |
| CDY14459 | Canola | nucleus, plastid | 18.12 | 16.53 |
| CDY48650 | Canola | nucleus, plastid | 16.33 | 16.48 |
| CDX74281 | Canola | nucleus | 16.55 | 16.41 |
| CDY14304 | Canola | nucleus | 19.46 | 15.9 |
| KRH34226 | Soybean | nucleus | 11.86 | 15.77 |
| CDX97359 | Canola | nucleus | 18.57 | 15.46 |
| CDX89317 | Canola | nucleus | 18.34 | 15.36 |
| CDX74976 | Canola | nucleus | 13.65 | 15.33 |
| KRH34224 | Soybean | nucleus | 12.53 | 15.26 |
| CDY70490 | Canola | nucleus | 17.67 | 15.25 |
| CDX94303 | Canola | nucleus | 18.12 | 15.23 |
| CDX93073 | Canola | nucleus | 12.53 | 15.22 |
| CDX92808 | Canola | nucleus | 17.67 | 15.08 |
| CDX91348 | Canola | nucleus | 13.42 | 14.93 |
| CDY46692 | Canola | nucleus | 17.45 | 14.86 |
| CDY52777 | Canola | nucleus, plastid | 5.59 | 14.62 |
| CDY50038 | Canola | nucleus | 12.98 | 13.3 |
| CDY36463 | Canola | nucleus | 10.96 | 12.28 |
| CDY23265 | Canola | nucleus | 10.96 | 10.72 |
| CDY13396 | Canola | nucleus | 11.41 | 9.6 |
| CDX72277 | Canola | nucleus | 11.19 | 6.82 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078J106 | UniProt:A0A078J106 | EnsemblPlants:CDY59057 | ProteinID:CDY59057 |
| ProteinID:CDY59057.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00025492001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE414A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g29320DBnaA08g29320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J106]
Coordinates
chrLK033722:+:20838..23417
Molecular Weight (calculated)
50550.5 Da
IEP (calculated)
4.872
GRAVY (calculated)
-0.824
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDWSGNSIE IWNPPKMSDC DGIVRAMLEQ TDNGLNSISQ IFPKTNLSTN HQSEQRSSLG ERVSSRIRFN VPPLETENIM SPFAVSRSQT NVPSPLIAVS
101: PGFSPSALLQ SPKKFSNSFS QHIIQSRVAN DGPPEMVESS GGDYATTTIF NNDVPHQPMN FDHMPHHEGF YDIPTEQSVY VPSHESHADL IGGPLVTSFE
201: SDEVANETDI MNIISLDSED EDEDYKEDEE YKEDENVDEE DDSVDELPPR KRRKYEVSDM FGAKRTRKDE RVILRMECEE DNPDDGYQWR KYGRKIVNGN
301: SNPRSYYKCT YGGCNVKKHV ERGADDVKLL VVTYDGKHNH PIPTGRSSNR SGPRNRSGFS VSQTPRLGRL PSSSSACQYC YSSLEPHPDM ALLYMTGLSK
401: LQSFPVNHNH GFMYRHDEPI IDRVIPDGTE VYNGMKDRLL PNFGFNF
101: PGFSPSALLQ SPKKFSNSFS QHIIQSRVAN DGPPEMVESS GGDYATTTIF NNDVPHQPMN FDHMPHHEGF YDIPTEQSVY VPSHESHADL IGGPLVTSFE
201: SDEVANETDI MNIISLDSED EDEDYKEDEE YKEDENVDEE DDSVDELPPR KRRKYEVSDM FGAKRTRKDE RVILRMECEE DNPDDGYQWR KYGRKIVNGN
301: SNPRSYYKCT YGGCNVKKHV ERGADDVKLL VVTYDGKHNH PIPTGRSSNR SGPRNRSGFS VSQTPRLGRL PSSSSACQYC YSSLEPHPDM ALLYMTGLSK
401: LQSFPVNHNH GFMYRHDEPI IDRVIPDGTE VYNGMKDRLL PNFGFNF
001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
Arabidopsis Description
WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.