Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026414.1-P | Field mustard | nucleus | 97.75 | 97.57 |
| CDX94303 | Canola | nucleus | 96.07 | 96.43 |
| CDX97359 | Canola | nucleus | 82.96 | 82.5 |
| CDX92808 | Canola | nucleus | 80.34 | 81.87 |
| CDY14304 | Canola | nucleus | 82.77 | 80.8 |
| CDY46692 | Canola | nucleus | 79.03 | 80.38 |
| AT4G26640.2 | Thale cress | nucleus | 83.15 | 79.71 |
| CDY70490 | Canola | nucleus | 60.49 | 62.36 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 54.49 | 49.32 |
| Solyc12g014610.1.1 | Tomato | nucleus | 50.94 | 44.52 |
| PGSC0003DMT400076670 | Potato | nucleus | 50.94 | 44.52 |
| Solyc07g065260.2.1 | Tomato | nucleus | 49.06 | 43.96 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 20.22 | 43.72 |
| PGSC0003DMT400057409 | Potato | nucleus | 48.69 | 43.62 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 41.57 | 43.27 |
| CDY05016 | Canola | nucleus | 25.28 | 42.32 |
| CDY14055 | Canola | nucleus | 25.28 | 42.32 |
| KRH49522 | Soybean | extracellular, plasma membrane | 18.54 | 39.29 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 41.39 | 38.37 |
| CDY29685 | Canola | nucleus | 24.34 | 37.14 |
| Os07t0583700-01 | Rice | nucleus | 42.88 | 37.05 |
| CDX97834 | Canola | nucleus | 24.91 | 36.84 |
| Zm00001d021947_P002 | Maize | nucleus | 42.13 | 36.7 |
| KXG36569 | Sorghum | nucleus | 41.76 | 36.5 |
| CDY10720 | Canola | nucleus | 25.47 | 36.46 |
| Zm00001d006702_P001 | Maize | nucleus | 41.39 | 36.23 |
| CDX84848 | Canola | nucleus | 24.53 | 34.66 |
| CDY53941 | Canola | nucleus | 28.46 | 34.55 |
| CDY24017 | Canola | nucleus | 24.34 | 34.39 |
| CDY36419 | Canola | nucleus | 29.21 | 34.29 |
| CDX98138 | Canola | nucleus | 29.03 | 33.92 |
| CDY65564 | Canola | nucleus, plastid | 29.59 | 33.55 |
| CDX91470 | Canola | nucleus, plastid | 29.78 | 33.4 |
| CDY02051 | Canola | nucleus | 17.23 | 33.21 |
| CDY69941 | Canola | nucleus, plastid | 29.59 | 33.12 |
| CDX96873 | Canola | nucleus | 28.84 | 33.05 |
| CDY18383 | Canola | nucleus, plastid | 29.59 | 32.85 |
| CDY62213 | Canola | nucleus | 28.46 | 32.76 |
| CDY33788 | Canola | nucleus | 26.97 | 32.58 |
| CDY07729 | Canola | nucleus | 28.65 | 32.35 |
| CDY72350 | Canola | nucleus | 8.61 | 31.72 |
| CDY45169 | Canola | nucleus | 28.84 | 31.69 |
| CDY14459 | Canola | nucleus, plastid | 29.03 | 31.63 |
| CDY16122 | Canola | nucleus | 26.4 | 31.47 |
| CDX94335 | Canola | nucleus | 30.15 | 31.32 |
| CDY37191 | Canola | nucleus | 28.46 | 31.28 |
| CDY03003 | Canola | nucleus | 28.46 | 31.08 |
| CDX74281 | Canola | nucleus | 26.22 | 31.04 |
| CDX89336 | Canola | nucleus | 30.9 | 30.9 |
| CDY69527 | Canola | nucleus | 30.9 | 30.39 |
| CDY42736 | Canola | nucleus | 29.96 | 30.25 |
| CDY11947 | Canola | nucleus | 32.21 | 29.97 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 33.71 | 29.41 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 33.71 | 29.32 |
| CDY48650 | Canola | nucleus, plastid | 24.16 | 29.12 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 33.52 | 29.11 |
| CDX93073 | Canola | nucleus | 20.04 | 29.08 |
| CDY36788 | Canola | nucleus | 33.52 | 28.69 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 33.52 | 28.06 |
| CDY49388 | Canola | nucleus | 34.08 | 27.12 |
| CDY62292 | Canola | nucleus | 10.49 | 26.92 |
| CDX74976 | Canola | nucleus | 19.66 | 26.38 |
| CDY50038 | Canola | nucleus | 20.97 | 25.69 |
| CDX91348 | Canola | nucleus | 19.29 | 25.62 |
| CDY62293 | Canola | nucleus | 9.36 | 24.63 |
| CDY32799 | Canola | nucleus | 26.22 | 23.29 |
| CDY36463 | Canola | nucleus | 17.23 | 23.06 |
| CDY47543 | Canola | nucleus | 11.24 | 21.2 |
| CDY23265 | Canola | nucleus | 17.42 | 20.35 |
| CDX79729 | Canola | nucleus | 11.98 | 19.88 |
| CDY46769 | Canola | nucleus | 11.98 | 19.81 |
| CDY46768 | Canola | nucleus | 11.98 | 19.81 |
| CDY10548 | Canola | nucleus | 15.54 | 19.26 |
| CDY47546 | Canola | nucleus | 14.04 | 19.08 |
| CDY59057 | Canola | nucleus | 15.36 | 18.34 |
| CDY13396 | Canola | nucleus | 17.98 | 18.08 |
| CDY26094 | Canola | nucleus | 14.04 | 18.03 |
| CDY08253 | Canola | nucleus | 14.04 | 18.03 |
| CDY52777 | Canola | nucleus, plastid | 4.87 | 15.2 |
| CDY67588 | Canola | nucleus | 14.23 | 14.73 |
| CDY54360 | Canola | nucleus | 14.79 | 14.21 |
| CDX72277 | Canola | nucleus | 18.16 | 13.23 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DK69 | EnsemblPlants:CDX89317 | ProteinID:CDX89317 | ProteinID:CDX89317.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00149533001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEC2A1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g15760D
Coordinates
chrLK031858:+:868564..871597
Molecular Weight (calculated)
58820.7 Da
IEP (calculated)
7.586
GRAVY (calculated)
-0.995
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPQVNNDRK EFPVDPTARH DSSRGGGNGG GGARYKLMSP AKLPISRSTD ITIPPGLSPT SFLESPVFIS NIKPEPSPTT GSLFKPRPVH VSSSSYTGRP
101: FHQDSTEQKS SEFEFRPPAS TMVYAELDKH KSEPAVQFQG QGYGSSHSPS SISEAAATSG DLRRPTQSSD IPAGSEVDES VQALQNDPRG SAPSVLADDG
201: YNWRKYGQKH VKGSEFPRSY YKCTHPNCEV KKLFERSYDG QITDIIYKGT HDHPKPQPGR RNSGGLGMSA QEERVEKSVY NLAQAIEQAG NPEVPPTTED
301: GGEVAVSNKS KDDQEEDDPY TKRRRLDGTM EITPLVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTAPGCPVRK HVERASHDPK
401: AVITTYEGKH NHDVPTSKSS SNHHDNQPRF RPGETDTVSL NLGVGISSDG PDHTSNERQH QNQQQLINQT HPNGVGFRFV HAAPVASYYA SLNGGLNQYA
501: PRETQNETQN GDISSLNHSS YPYPHNIGRI QSGP
101: FHQDSTEQKS SEFEFRPPAS TMVYAELDKH KSEPAVQFQG QGYGSSHSPS SISEAAATSG DLRRPTQSSD IPAGSEVDES VQALQNDPRG SAPSVLADDG
201: YNWRKYGQKH VKGSEFPRSY YKCTHPNCEV KKLFERSYDG QITDIIYKGT HDHPKPQPGR RNSGGLGMSA QEERVEKSVY NLAQAIEQAG NPEVPPTTED
301: GGEVAVSNKS KDDQEEDDPY TKRRRLDGTM EITPLVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTAPGCPVRK HVERASHDPK
401: AVITTYEGKH NHDVPTSKSS SNHHDNQPRF RPGETDTVSL NLGVGISSDG PDHTSNERQH QNQQQLINQT HPNGVGFRFV HAAPVASYYA SLNGGLNQYA
501: PRETQNETQN GDISSLNHSS YPYPHNIGRI QSGP
001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.