Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72350 | Canola | nucleus | 66.35 | 95.17 |
| Bra030848.1-P | Field mustard | nucleus | 63.94 | 65.52 |
| CDY62293 | Canola | nucleus | 62.98 | 64.53 |
| CDY26094 | Canola | nucleus | 51.92 | 25.96 |
| CDY08253 | Canola | nucleus | 50.96 | 25.48 |
| CDY10548 | Canola | nucleus | 50.48 | 24.36 |
| CDY47543 | Canola | nucleus | 32.21 | 23.67 |
| CDY59057 | Canola | nucleus | 50.0 | 23.27 |
| CDY47546 | Canola | nucleus | 40.87 | 21.63 |
| CDY67588 | Canola | nucleus | 48.56 | 19.57 |
| CDY54360 | Canola | nucleus | 49.04 | 18.35 |
| CDY02051 | Canola | nucleus | 22.12 | 16.61 |
| CDY14055 | Canola | nucleus | 22.6 | 14.73 |
| KRH70820 | Soybean | nucleus, plastid | 25.48 | 14.56 |
| CDY05016 | Canola | nucleus | 22.12 | 14.42 |
| CDY29685 | Canola | nucleus | 21.63 | 12.86 |
| CDX93073 | Canola | nucleus | 22.6 | 12.77 |
| KRG89512 | Soybean | nucleus | 25.96 | 12.3 |
| CDX97834 | Canola | nucleus | 21.15 | 12.19 |
| CDY36419 | Canola | nucleus | 26.44 | 12.09 |
| CDY10720 | Canola | nucleus | 21.63 | 12.06 |
| CDY53941 | Canola | nucleus | 25.48 | 12.05 |
| CDX98138 | Canola | nucleus | 26.44 | 12.04 |
| CDX96873 | Canola | nucleus | 26.44 | 11.8 |
| KRH50544 | Soybean | nucleus | 25.0 | 11.76 |
| CDY62213 | Canola | nucleus | 25.96 | 11.64 |
| CDX74281 | Canola | nucleus | 25.0 | 11.53 |
| CDX79729 | Canola | nucleus | 17.79 | 11.49 |
| CDY46769 | Canola | nucleus | 17.79 | 11.46 |
| CDY46768 | Canola | nucleus | 17.79 | 11.46 |
| KRH74950 | Soybean | nucleus | 25.0 | 11.43 |
| CDY16122 | Canola | nucleus | 24.52 | 11.38 |
| CDY24017 | Canola | nucleus | 20.67 | 11.38 |
| CDY33788 | Canola | nucleus | 24.04 | 11.31 |
| CDY36463 | Canola | nucleus | 21.63 | 11.28 |
| CDY69527 | Canola | nucleus | 29.33 | 11.23 |
| PGSC0003DMT400072836 | Potato | nucleus | 27.4 | 11.22 |
| Solyc05g012770.2.1 | Tomato | nucleus | 27.4 | 11.22 |
| CDY42736 | Canola | nucleus | 28.37 | 11.15 |
| CDX84848 | Canola | nucleus | 20.19 | 11.11 |
| CDX94335 | Canola | nucleus | 27.4 | 11.09 |
| CDY37191 | Canola | nucleus | 25.48 | 10.91 |
| CDY45169 | Canola | nucleus | 25.48 | 10.91 |
| CDX92808 | Canola | nucleus | 27.4 | 10.88 |
| CDY46692 | Canola | nucleus | 27.4 | 10.86 |
| CDY70490 | Canola | nucleus | 26.92 | 10.81 |
| CDX94303 | Canola | nucleus | 27.4 | 10.71 |
| CDY32799 | Canola | nucleus | 30.77 | 10.65 |
| CDY03003 | Canola | nucleus | 25.0 | 10.63 |
| CDY11947 | Canola | nucleus | 29.33 | 10.63 |
| CDX97359 | Canola | nucleus | 27.4 | 10.61 |
| CDY50038 | Canola | nucleus | 22.12 | 10.55 |
| CDX89336 | Canola | nucleus | 26.92 | 10.49 |
| CDX89317 | Canola | nucleus | 26.92 | 10.49 |
| CDY14304 | Canola | nucleus | 27.4 | 10.42 |
| CDY69941 | Canola | nucleus, plastid | 23.56 | 10.27 |
| CDY18383 | Canola | nucleus, plastid | 23.56 | 10.19 |
| CDY07729 | Canola | nucleus | 22.6 | 9.94 |
| CDY36788 | Canola | nucleus | 29.81 | 9.94 |
| CDX91470 | Canola | nucleus, plastid | 22.6 | 9.87 |
| CDY65564 | Canola | nucleus, plastid | 22.12 | 9.77 |
| VIT_01s0011g00220.t01 | Wine grape | nucleus | 23.56 | 9.76 |
| CDY23265 | Canola | nucleus | 21.15 | 9.63 |
| CDY49388 | Canola | nucleus | 30.77 | 9.54 |
| CDY14459 | Canola | nucleus, plastid | 22.12 | 9.39 |
| CDX74976 | Canola | nucleus | 17.31 | 9.05 |
| CDY48650 | Canola | nucleus, plastid | 19.23 | 9.03 |
| CDY13396 | Canola | nucleus | 21.63 | 8.47 |
| CDX91348 | Canola | nucleus | 16.35 | 8.46 |
| CDX72277 | Canola | nucleus | 22.12 | 6.28 |
| CDY52777 | Canola | nucleus, plastid | 0.96 | 1.17 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078J9P0 | UniProt:A0A078J9P0 | EnsemblPlants:CDY62292 | ProteinID:CDY62292 |
| ProteinID:CDY62292.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00036145001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EBF249 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
Description
BnaCnng39880DBnaCnng39880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9P0]
Coordinates
chrLK034126:-:23463..24842
Molecular Weight (calculated)
23707.1 Da
IEP (calculated)
9.787
GRAVY (calculated)
-0.841
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MMISNNGLPH QRIDVDQAPE DHNIVDVLNV EPSSPERRGN EVSLSNMIMA SRTGRYDERV VIQMKSEENN LDDGYSWKKY GQKLIRGNPN ARSYYKCTFS
101: GCDVKKHVER SADNAKSLVI TYYGNHEHDA PVKRRKCYSL KKRSGSSMFQ DASNRTPRLG RPPFSSSAFQ VFPPSLEPHL DMTQINMKGL SKLPSLPANQ
201: MVHRYTWG
101: GCDVKKHVER SADNAKSLVI TYYGNHEHDA PVKRRKCYSL KKRSGSSMFQ DASNRTPRLG RPPFSSSAFQ VFPPSLEPHL DMTQINMKGL SKLPSLPANQ
201: MVHRYTWG
001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
Arabidopsis Description
WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.