Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67588 | Canola | nucleus | 83.09 | 89.53 |
| CDY10548 | Canola | nucleus | 39.93 | 51.51 |
| CDY59057 | Canola | nucleus | 41.37 | 51.45 |
| CDY72350 | Canola | nucleus | 13.31 | 51.03 |
| CDY08253 | Canola | nucleus | 38.13 | 50.96 |
| CDY26094 | Canola | nucleus | 37.95 | 50.72 |
| CDY62292 | Canola | nucleus | 18.35 | 49.04 |
| CDY47546 | Canola | nucleus | 31.83 | 45.04 |
| AT1G55600.1 | Thale cress | nucleus | 39.21 | 44.95 |
| CDY62293 | Canola | nucleus | 14.93 | 40.89 |
| CDY47543 | Canola | nucleus | 20.5 | 40.28 |
| CDY02051 | Canola | nucleus | 11.51 | 23.1 |
| CDX94335 | Canola | nucleus | 18.17 | 19.65 |
| CDY11947 | Canola | nucleus | 19.96 | 19.34 |
| CDY69527 | Canola | nucleus | 18.88 | 19.34 |
| CDY42736 | Canola | nucleus | 18.17 | 19.09 |
| CDY32799 | Canola | nucleus | 20.5 | 18.97 |
| CDX89336 | Canola | nucleus | 17.99 | 18.73 |
| CDY10720 | Canola | nucleus | 12.41 | 18.5 |
| CDX79729 | Canola | nucleus | 10.43 | 18.01 |
| CDY29685 | Canola | nucleus | 11.33 | 18.0 |
| CDY46769 | Canola | nucleus | 10.43 | 17.96 |
| CDY46768 | Canola | nucleus | 10.43 | 17.96 |
| CDY36788 | Canola | nucleus | 20.14 | 17.95 |
| CDY05016 | Canola | nucleus | 10.25 | 17.87 |
| CDY14055 | Canola | nucleus | 10.25 | 17.87 |
| CDX91470 | Canola | nucleus, plastid | 15.29 | 17.86 |
| CDX97834 | Canola | nucleus | 11.51 | 17.73 |
| CDY65564 | Canola | nucleus, plastid | 14.93 | 17.62 |
| CDX84848 | Canola | nucleus | 11.87 | 17.46 |
| CDY24017 | Canola | nucleus | 11.87 | 17.46 |
| CDY49388 | Canola | nucleus | 20.86 | 17.29 |
| CDY69941 | Canola | nucleus, plastid | 14.75 | 17.19 |
| CDY18383 | Canola | nucleus, plastid | 14.75 | 17.05 |
| CDY62213 | Canola | nucleus | 14.21 | 17.03 |
| CDX96873 | Canola | nucleus | 14.21 | 16.95 |
| CDY48650 | Canola | nucleus, plastid | 13.49 | 16.93 |
| CDY53941 | Canola | nucleus | 13.31 | 16.82 |
| CDY36419 | Canola | nucleus | 13.67 | 16.7 |
| CDX98138 | Canola | nucleus | 13.67 | 16.63 |
| KRH34226 | Soybean | nucleus | 9.89 | 16.37 |
| CDX93073 | Canola | nucleus | 10.79 | 16.3 |
| CDY07729 | Canola | nucleus | 13.85 | 16.28 |
| CDX74281 | Canola | nucleus | 12.95 | 15.96 |
| CDY14459 | Canola | nucleus, plastid | 14.03 | 15.92 |
| CDY16122 | Canola | nucleus | 12.77 | 15.85 |
| CDY37191 | Canola | nucleus | 13.85 | 15.84 |
| CDY45169 | Canola | nucleus | 13.85 | 15.84 |
| CDY33788 | Canola | nucleus | 12.59 | 15.84 |
| CDY03003 | Canola | nucleus | 13.85 | 15.75 |
| KRH34224 | Soybean | nucleus | 10.25 | 15.53 |
| CDY70490 | Canola | nucleus | 14.21 | 15.25 |
| CDX94303 | Canola | nucleus | 14.39 | 15.04 |
| CDY14304 | Canola | nucleus | 14.75 | 14.99 |
| CDX89317 | Canola | nucleus | 14.21 | 14.79 |
| CDX97359 | Canola | nucleus | 14.21 | 14.71 |
| CDX91348 | Canola | nucleus | 10.43 | 14.43 |
| CDX74976 | Canola | nucleus | 10.25 | 14.32 |
| CDX92808 | Canola | nucleus | 13.49 | 14.31 |
| CDY50038 | Canola | nucleus | 11.15 | 14.22 |
| CDY46692 | Canola | nucleus | 13.31 | 14.1 |
| CDY36463 | Canola | nucleus | 8.99 | 12.53 |
| CDY23265 | Canola | nucleus | 9.17 | 11.16 |
| CDY13396 | Canola | nucleus | 8.81 | 9.23 |
| CDY52777 | Canola | nucleus, plastid | 2.7 | 8.77 |
| CDX72277 | Canola | nucleus | 8.81 | 6.68 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IT85 | UniProt:A0A078IT85 | EnsemblPlants:CDY54360 | ProteinID:CDY54360 |
| ProteinID:CDY54360.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00013939001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEA554 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g07320DBnaC06g07320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT85]
Coordinates
chrLK033309:+:24498..27111
Molecular Weight (calculated)
62469.5 Da
IEP (calculated)
4.924
GRAVY (calculated)
-0.892
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDYGDGNFM DMVSSNWAPP PSTSLSDNGL NPISDIFLQT NQSKQRPGLV DRVAARIGRN IPPIRTDNLS PFAVSKNPKT VPFGIEISPG LSSSVMLQSP
101: SHLINPYSFP NDELPETVEN SGDDHAKTMI FNNDVPYQPM HFDLPPQEDS NVIPALIPSH ESHVDPIGVP LVASFESEVA DDTDTIKLMS LDDESESQDE
201: EESNEDEDTD DPSKLGRKRR IDEEEDDDIA DEHEVKPSSP KRSRKYDEVS NMMTALRTSN VMLRMETEED QPNDDYRWRK YGQKIVKGNP NPRSYYKCSH
301: KGCNVKKHVE RAADDLRMLL VTYYGKHGHA APLTRSSSSS GPKNLSRSSV PARLGRPPFS SSSAAQDMRP FPYPSASAPR DMRRFGYPSA LAPQAMRPFP
401: SSLNPGVDMT HLYKTGLPKL PRLPVNQNHG FMGQNAEPWV NQNHEFMGQN AEPWVNQNHG FMGQNDEAWV NQNHGFMGQN DEAWVNQNHG FMGQNDEPWL
501: NQNHGFMGQN DEPWVNQNHV FMGQNDEPKT DHVIPDGTEV YKGLMERMLA NLGVKR
101: SHLINPYSFP NDELPETVEN SGDDHAKTMI FNNDVPYQPM HFDLPPQEDS NVIPALIPSH ESHVDPIGVP LVASFESEVA DDTDTIKLMS LDDESESQDE
201: EESNEDEDTD DPSKLGRKRR IDEEEDDDIA DEHEVKPSSP KRSRKYDEVS NMMTALRTSN VMLRMETEED QPNDDYRWRK YGQKIVKGNP NPRSYYKCSH
301: KGCNVKKHVE RAADDLRMLL VTYYGKHGHA APLTRSSSSS GPKNLSRSSV PARLGRPPFS SSSAAQDMRP FPYPSASAPR DMRRFGYPSA LAPQAMRPFP
401: SSLNPGVDMT HLYKTGLPKL PRLPVNQNHG FMGQNAEPWV NQNHEFMGQN AEPWVNQNHG FMGQNDEAWV NQNHGFMGQN DEAWVNQNHG FMGQNDEPWL
501: NQNHGFMGQN DEPWVNQNHV FMGQNDEPKT DHVIPDGTEV YKGLMERMLA NLGVKR
001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
Arabidopsis Description
WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.