Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46769 | Canola | nucleus | 99.69 | 99.38 |
| CDY46768 | Canola | nucleus | 98.45 | 98.14 |
| Bra023112.1-P | Field mustard | nucleus | 97.83 | 75.0 |
| AT2G37260.1 | Thale cress | nucleus | 78.88 | 59.21 |
| CDX74976 | Canola | nucleus | 72.05 | 58.29 |
| CDX91348 | Canola | nucleus | 72.67 | 58.21 |
| VIT_08s0040g03070.t01 | Wine grape | nucleus | 46.27 | 31.24 |
| KRH67621 | Soybean | nucleus | 40.99 | 29.46 |
| KRG95903 | Soybean | nucleus | 42.24 | 28.87 |
| GSMUA_Achr1P17160_001 | Banana | nucleus | 31.68 | 24.82 |
| PGSC0003DMT400028530 | Potato | nucleus | 34.47 | 23.77 |
| Solyc10g084380.1.1 | Tomato | nucleus | 30.43 | 23.22 |
| CDY02051 | Canola | nucleus | 19.57 | 22.74 |
| GSMUA_Achr4P16840_001 | Banana | nucleus | 28.88 | 22.09 |
| CDY72350 | Canola | nucleus | 9.63 | 21.38 |
| CDY29685 | Canola | nucleus | 20.5 | 18.86 |
| CDX97834 | Canola | nucleus | 20.81 | 18.56 |
| CDY62293 | Canola | nucleus | 11.49 | 18.23 |
| CDY05016 | Canola | nucleus | 18.01 | 18.18 |
| CDY14055 | Canola | nucleus | 17.7 | 17.87 |
| CDY62292 | Canola | nucleus | 11.49 | 17.79 |
| CDY53941 | Canola | nucleus | 23.91 | 17.5 |
| CDY10720 | Canola | nucleus | 20.19 | 17.43 |
| CDY24017 | Canola | nucleus | 20.19 | 17.2 |
| CDX84848 | Canola | nucleus | 19.88 | 16.93 |
| CDY36419 | Canola | nucleus | 23.6 | 16.7 |
| CDX98138 | Canola | nucleus | 23.6 | 16.63 |
| CDX96873 | Canola | nucleus | 23.91 | 16.52 |
| CDY62213 | Canola | nucleus | 23.6 | 16.38 |
| CDY33788 | Canola | nucleus | 22.36 | 16.29 |
| CDY47543 | Canola | nucleus | 14.29 | 16.25 |
| CDY03003 | Canola | nucleus | 24.53 | 16.16 |
| CDY45169 | Canola | nucleus | 24.22 | 16.05 |
| CDX74281 | Canola | nucleus | 22.36 | 15.96 |
| CDY37191 | Canola | nucleus | 23.6 | 15.64 |
| CDY16122 | Canola | nucleus | 21.74 | 15.62 |
| CDX91470 | Canola | nucleus, plastid | 22.98 | 15.55 |
| CDY65564 | Canola | nucleus, plastid | 22.67 | 15.5 |
| CDY48650 | Canola | nucleus, plastid | 20.5 | 14.9 |
| CDY69941 | Canola | nucleus, plastid | 22.05 | 14.88 |
| CDY18383 | Canola | nucleus, plastid | 21.74 | 14.55 |
| CDY07729 | Canola | nucleus | 21.12 | 14.38 |
| CDX94335 | Canola | nucleus | 22.67 | 14.2 |
| CDY26094 | Canola | nucleus | 18.32 | 14.18 |
| CDY08253 | Canola | nucleus | 18.32 | 14.18 |
| CDY14459 | Canola | nucleus, plastid | 21.43 | 14.08 |
| CDY10548 | Canola | nucleus | 18.63 | 13.92 |
| CDY59057 | Canola | nucleus | 19.25 | 13.87 |
| CDY69527 | Canola | nucleus | 23.29 | 13.81 |
| CDX89336 | Canola | nucleus | 22.67 | 13.67 |
| CDY42736 | Canola | nucleus | 22.36 | 13.61 |
| CDY70490 | Canola | nucleus | 21.74 | 13.51 |
| CDY32799 | Canola | nucleus | 25.16 | 13.48 |
| CDY47546 | Canola | nucleus | 16.15 | 13.23 |
| CDX93073 | Canola | nucleus | 14.91 | 13.04 |
| CDY49388 | Canola | nucleus | 25.47 | 12.22 |
| CDY11947 | Canola | nucleus | 21.43 | 12.02 |
| CDX89317 | Canola | nucleus | 19.88 | 11.98 |
| CDY50038 | Canola | nucleus | 16.15 | 11.93 |
| CDX97359 | Canola | nucleus | 19.88 | 11.92 |
| CDY14304 | Canola | nucleus | 20.19 | 11.88 |
| CDY36788 | Canola | nucleus | 22.98 | 11.86 |
| CDX94303 | Canola | nucleus | 19.57 | 11.84 |
| CDY36463 | Canola | nucleus | 14.29 | 11.53 |
| CDX92808 | Canola | nucleus | 18.63 | 11.45 |
| CDY46692 | Canola | nucleus | 18.32 | 11.24 |
| CDY67588 | Canola | nucleus | 17.39 | 10.85 |
| CDY54360 | Canola | nucleus | 18.01 | 10.43 |
| CDY23265 | Canola | nucleus | 14.29 | 10.07 |
| CDY13396 | Canola | nucleus | 15.53 | 9.42 |
| CDY52777 | Canola | nucleus, plastid | 4.04 | 7.6 |
| CDX72277 | Canola | nucleus | 14.91 | 6.55 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CUN2 | EnsemblPlants:CDX79729 | ProteinID:CDX79729 | ProteinID:CDX79729.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00132547001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF50 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEBE26 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g20650D
Coordinates
chrLK031818:+:1951761..1953900
Molecular Weight (calculated)
35269.8 Da
IEP (calculated)
9.622
GRAVY (calculated)
-0.807
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVKESKRVV IAKPVASRPS FTSIRTFANL LTDSVTVPPH ETVDAAIRPK TLRFKQPAAA AASVSCPQVE GNDKGKSCVD SDTKSYVVYK PKAKLVSQAT
101: VSALANMGNH QQVWRQSEAV PYGKSVSQGF QRPQRELASE GSIGQDPSNV YYHPLWSNQS NDSSKSIAEK MNDGCVITPF EFAVPRSANS TGGTSDSGCR
201: SSSQCDEGEL DDPSRSKRSR KNEKQASQTG VSQSSVESDS LEDGFRWRKY GQKVVGGNAH PRSYYRCTSA NCRARKHVER ASDDPRAFIT TYEGKHNHHL
301: NLRPPTSPTL PFTSTQHSNQ AI
101: VSALANMGNH QQVWRQSEAV PYGKSVSQGF QRPQRELASE GSIGQDPSNV YYHPLWSNQS NDSSKSIAEK MNDGCVITPF EFAVPRSANS TGGTSDSGCR
201: SSSQCDEGEL DDPSRSKRSR KNEKQASQTG VSQSSVESDS LEDGFRWRKY GQKVVGGNAH PRSYYRCTSA NCRARKHVER ASDDPRAFIT TYEGKHNHHL
301: NLRPPTSPTL PFTSTQHSNQ AI
001: MEVNDGERVV IAKPVASRPS SSSGFRTFTE LLTDSVTVSP QTTCHEIVDA AIRPKTLRFN QPVAASVSCP RAEVKGIGNG MSCDDDSDSR NYVVYKPKAK
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI
Arabidopsis Description
WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.