Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92808 | Canola | nucleus | 90.67 | 90.84 |
| CDX89317 | Canola | nucleus | 80.38 | 79.03 |
| CDX97359 | Canola | nucleus | 80.57 | 78.77 |
| CDX94303 | Canola | nucleus | 79.43 | 78.38 |
| CDY14304 | Canola | nucleus | 80.95 | 77.7 |
| AT4G26640.2 | Thale cress | nucleus | 81.71 | 77.02 |
| Bra019095.1-P | Field mustard | nucleus | 93.9 | 65.38 |
| CDY70490 | Canola | nucleus | 57.33 | 58.11 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 55.05 | 48.98 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 20.57 | 43.72 |
| PGSC0003DMT400076670 | Potato | nucleus | 49.14 | 42.23 |
| Solyc12g014610.1.1 | Tomato | nucleus | 49.14 | 42.23 |
| PGSC0003DMT400057409 | Potato | nucleus | 47.43 | 41.78 |
| Solyc07g065260.2.1 | Tomato | nucleus | 47.24 | 41.61 |
| CDY05016 | Canola | nucleus | 25.14 | 41.38 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 40.0 | 40.94 |
| CDY14055 | Canola | nucleus | 24.76 | 40.75 |
| Os07t0583700-01 | Rice | nucleus | 43.62 | 37.05 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 40.38 | 36.81 |
| KRH49522 | Soybean | extracellular, plasma membrane | 17.52 | 36.51 |
| CDY29685 | Canola | nucleus | 24.19 | 36.29 |
| CDX97834 | Canola | nucleus | 24.76 | 36.01 |
| CDY10720 | Canola | nucleus | 25.33 | 35.66 |
| Zm00001d021947_P002 | Maize | nucleus | 41.52 | 35.56 |
| KXG36569 | Sorghum | nucleus | 40.95 | 35.19 |
| Zm00001d006702_P001 | Maize | nucleus | 40.76 | 35.08 |
| CDX84848 | Canola | nucleus | 24.19 | 33.6 |
| CDY24017 | Canola | nucleus | 24.19 | 33.6 |
| CDY36419 | Canola | nucleus | 28.95 | 33.41 |
| CDY65564 | Canola | nucleus, plastid | 29.71 | 33.12 |
| CDX98138 | Canola | nucleus | 28.76 | 33.04 |
| CDX91470 | Canola | nucleus, plastid | 29.9 | 32.98 |
| CDY53941 | Canola | nucleus | 27.24 | 32.5 |
| CDY02051 | Canola | nucleus | 16.95 | 32.13 |
| CDY69941 | Canola | nucleus, plastid | 29.14 | 32.08 |
| CDY33788 | Canola | nucleus | 26.86 | 31.9 |
| CDY18383 | Canola | nucleus, plastid | 29.14 | 31.81 |
| CDY72350 | Canola | nucleus | 8.76 | 31.72 |
| CDY07729 | Canola | nucleus | 28.57 | 31.71 |
| CDY62213 | Canola | nucleus | 27.62 | 31.25 |
| CDY16122 | Canola | nucleus | 26.67 | 31.25 |
| CDY14459 | Canola | nucleus, plastid | 28.76 | 30.82 |
| CDX96873 | Canola | nucleus | 27.24 | 30.69 |
| CDY37191 | Canola | nucleus | 27.81 | 30.04 |
| CDY45169 | Canola | nucleus | 27.81 | 30.04 |
| CDX74281 | Canola | nucleus | 25.71 | 29.93 |
| CDX94335 | Canola | nucleus | 28.95 | 29.57 |
| CDY03003 | Canola | nucleus | 27.43 | 29.45 |
| CDY48650 | Canola | nucleus, plastid | 24.76 | 29.35 |
| CDX89336 | Canola | nucleus | 29.52 | 29.03 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 33.52 | 28.76 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 33.52 | 28.66 |
| CDX93073 | Canola | nucleus | 20.0 | 28.53 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 33.33 | 28.46 |
| CDY11947 | Canola | nucleus | 31.05 | 28.4 |
| CDY69527 | Canola | nucleus | 29.33 | 28.36 |
| CDY42736 | Canola | nucleus | 28.57 | 28.36 |
| CDY36788 | Canola | nucleus | 33.14 | 27.88 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 33.33 | 27.43 |
| CDY62292 | Canola | nucleus | 10.86 | 27.4 |
| CDY49388 | Canola | nucleus | 33.33 | 26.08 |
| CDX74976 | Canola | nucleus | 19.62 | 25.88 |
| CDX91348 | Canola | nucleus | 19.24 | 25.12 |
| CDY62293 | Canola | nucleus | 9.71 | 25.12 |
| CDY50038 | Canola | nucleus | 20.38 | 24.54 |
| CDY36463 | Canola | nucleus | 17.52 | 23.06 |
| CDY32799 | Canola | nucleus | 25.14 | 21.96 |
| CDY47543 | Canola | nucleus | 11.43 | 21.2 |
| CDY23265 | Canola | nucleus | 18.29 | 21.01 |
| CDY47546 | Canola | nucleus | 14.29 | 19.08 |
| CDY13396 | Canola | nucleus | 18.67 | 18.46 |
| CDY10548 | Canola | nucleus | 15.05 | 18.33 |
| CDX79729 | Canola | nucleus | 11.24 | 18.32 |
| CDY46769 | Canola | nucleus | 11.24 | 18.27 |
| CDY46768 | Canola | nucleus | 11.24 | 18.27 |
| CDY59057 | Canola | nucleus | 14.86 | 17.45 |
| CDY08253 | Canola | nucleus | 13.14 | 16.59 |
| CDY26094 | Canola | nucleus | 13.14 | 16.59 |
| CDY67588 | Canola | nucleus | 13.33 | 13.57 |
| CDY54360 | Canola | nucleus | 14.1 | 13.31 |
| CDX72277 | Canola | nucleus | 18.29 | 13.1 |
| CDY52777 | Canola | nucleus, plastid | 4.0 | 12.28 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078I9A6 | UniProt:A0A078I9A6 | EnsemblPlants:CDY46692 | ProteinID:CDY46692 |
| ProteinID:CDY46692.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00085997001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEA07F | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g48160DBnaA03g48160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9A6]
Coordinates
chrLK032681:+:175440..178519
Molecular Weight (calculated)
58484.1 Da
IEP (calculated)
7.436
GRAVY (calculated)
-1.064
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPQADNERK ESQDSTARHN SAVGGGGARY RLMSPAKLPI SRCNDISRLS PTSFLESPVF ISNIKPEPSP TTGSLFKPRP VHVNSSSYTG RTLHQNTFTE
101: HKSTEFEFRP PASNMVYAEH RSEPPVQDHG SSHSPSSISE TAASSTDLSR PTPPPLQTPP TGSDQDESVQ TSQNDSRGST PSVLADDGYN WRKYGQKHVK
201: GSEFPRSYYK CTHPNCEVKK LFERSHDGKM TEIIYKGTHD HPKPQPGRRN SAAQEESVSS NDYSRDGKTI YNKGVYNLSQ AIEQTGNNNP EVPPTTEDGG
301: EVKDDLEEEE DPFTKRRRLE GSMEITTPLV KPIREPRVVV QTLSEVDILD DGYKWRKYGQ KVVRGNPNPR SYYKCTAPGC PVRKHVERAS HDPKAVITTY
401: EGKHNHDVPT SKSTNHHVIQ PRFRPDETTD TISLNLGVGI SSDGPDNTSN ERNQQLLINQ THPNGVGFRF VHAAPMSYYH ASLNSGIHQY GSRETQNETQ
501: NGDVSSLNHS SYQYPHNIGR IQSGP
101: HKSTEFEFRP PASNMVYAEH RSEPPVQDHG SSHSPSSISE TAASSTDLSR PTPPPLQTPP TGSDQDESVQ TSQNDSRGST PSVLADDGYN WRKYGQKHVK
201: GSEFPRSYYK CTHPNCEVKK LFERSHDGKM TEIIYKGTHD HPKPQPGRRN SAAQEESVSS NDYSRDGKTI YNKGVYNLSQ AIEQTGNNNP EVPPTTEDGG
301: EVKDDLEEEE DPFTKRRRLE GSMEITTPLV KPIREPRVVV QTLSEVDILD DGYKWRKYGQ KVVRGNPNPR SYYKCTAPGC PVRKHVERAS HDPKAVITTY
401: EGKHNHDVPT SKSTNHHVIQ PRFRPDETTD TISLNLGVGI SSDGPDNTSN ERNQQLLINQ THPNGVGFRF VHAAPMSYYH ASLNSGIHQY GSRETQNETQ
501: NGDVSSLNHS SYQYPHNIGR IQSGP
001: MTPTSSDIPA GSDQEESIQT SQNDSRGSTP SILADDGYNW RKYGQKHVKG SEFPRSYYKC THPNCEVKKL FERSHDGQIT DIIYKGTHDH PKPQPGRRNS
101: GGMAAQEERL DKYPSSTGRD EKGSGVYNLS NPNEQTGNPE VPPISASDDG GEAAASNRNK DEPDDDDPFS KRRRMEGAME ITPLVKPIRE PRVVVQTLSE
201: VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TAHGCPVRKH VERASHDPKA VITTYEGKHD HDVPTSKSSS NHEIQPRFRP DETDTISLNL GVGISSDGPN
301: HASNEHQHQN QQLVNQTHPN GVNFRFVHAS PMSSYYASLN SGMNQYGQRE TKNETQNGDI SSLNNSSYPY PPNMGRVQSG P
101: GGMAAQEERL DKYPSSTGRD EKGSGVYNLS NPNEQTGNPE VPPISASDDG GEAAASNRNK DEPDDDDPFS KRRRMEGAME ITPLVKPIRE PRVVVQTLSE
201: VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TAHGCPVRKH VERASHDPKA VITTYEGKHD HDVPTSKSSS NHEIQPRFRP DETDTISLNL GVGISSDGPN
301: HASNEHQHQN QQLVNQTHPN GVNFRFVHAS PMSSYYASLN SGMNQYGQRE TKNETQNGDI SSLNNSSYPY PPNMGRVQSG P
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.