Factsheet for Bra019095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46692	Canola	nucleus	65.38	93.9
Bra026414.1-P	Field mustard	nucleus	55.57	78.32
Bra010431.1-P	Field mustard	nucleus	55.97	77.43
AT4G26640.2	Thale cress	nucleus	56.9	77.02
Bra028971.1-P	Field mustard	nucleus	40.98	63.71
VIT_19s0090g01720.t01	Wine grape	nucleus	38.2	48.81
GSMUA_Achr7P25840_001	Banana	nucleus	14.06	42.91
Solyc12g014610.1.1	Tomato	nucleus	34.35	42.39
PGSC0003DMT400076670	Potato	nucleus	34.35	42.39
PGSC0003DMT400057409	Potato	nucleus	33.16	41.95
Solyc07g065260.2.1	Tomato	nucleus	33.02	41.78
Bra028707.1-P	Field mustard	nucleus	17.37	41.07
GSMUA_Achr4P13970_001	Banana	nucleus	27.85	40.94
Os07t0583700-01	Rice	nucleus	30.77	37.54
GSMUA_Achr3P29850_001	Banana	nucleus	28.38	37.15
KRH49522	Soybean	extracellular, plasma membrane	12.33	36.9
Zm00001d021947_P002	Maize	nucleus	29.44	36.22
Bra021623.1-P	Field mustard	nucleus	16.71	36.0
KXG36569	Sorghum	nucleus	29.05	35.84
Zm00001d006702_P001	Maize	nucleus	28.91	35.74
Bra018325.1-P	Field mustard	nucleus	17.51	35.39
Bra005104.1-P	Field mustard	nucleus	20.29	33.48
Bra022786.1-P	Field mustard	nucleus	16.45	32.8
Bra017117.1-P	Field mustard	nucleus	20.03	32.61
Bra016716.1-P	Field mustard	nucleus	19.76	32.04
Bra026554.1-P	Field mustard	nucleus	20.16	32.0
Bra000064.1-P	Field mustard	nucleus	19.76	31.5
Bra026869.1-P	Field mustard	nucleus	19.89	31.25
Bra019697.1-P	Field mustard	nucleus	20.42	31.24
Bra028939.1-P	Field mustard	nucleus	18.43	30.96
Bra024780.1-P	Field mustard	nucleus	19.5	30.25
TraesCS2A01G189700.1	Wheat	nucleus	23.61	29.09
Bra026438.1-P	Field mustard	nucleus	20.56	29.03
TraesCS2B01G217400.2	Wheat	nucleus	23.61	28.99
HORVU2Hr1G036320.1	Barley	nucleus	23.47	28.78
Bra019105.1-P	Field mustard	nucleus	19.89	28.36
TraesCS2D01G198100.4	Wheat	nucleus	23.47	27.74
Bra030848.1-P	Field mustard	nucleus	7.03	26.11
Bra002828.1-P	Field mustard	nucleus	22.94	25.71
Bra023112.1-P	Field mustard	nucleus	13.79	24.76
Bra005210.1-P	Field mustard	nucleus	13.4	24.69
Bra013187.1-P	Field mustard	nucleus	14.32	24.16
Bra010266.1-P	Field mustard	nucleus	12.07	19.91
Bra030847.1-P	Field mustard	nucleus	10.34	17.45
Bra037106.1-P	Field mustard	nucleus	9.68	16.9
Bra024035.1-P	Field mustard	nucleus	12.73	16.3
Bra038006.1-P	Field mustard	nucleus	9.55	11.01

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra019095	EnsemblPlants:Bra019095.1	EnsemblPlants:Bra019095.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DRF2	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI00025411E8	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT4G26640 (E=8e-108) WRKY20, AtWRKY20 | WRKY20; transcription factor

Coordinates

chrA03:-:26340290..26349388

Molecular Weight (calculated)

83686.5 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.794

Length

754 amino acids

Sequence
(BLAST)

001: MNPQADNDRK ESQDSTARHN SAVGGGGGAR YRLMSPAKLP ISRCNDITIP PGMSPTSFLE SPVFISNIKP EPSPTTGSLF KPRPVHVNSS SYTGRTLHQN
101: TFTEHKSTEF EFRPPASNMV YAEHRSEPPV QDHGSSHSPS SISETAASST DLSRPTPPPL QTPPTGSDQD ESVQTSQNDS RGSTPSVLAD DGYNWRKNGQ
201: KHVKGSEFPR SYYKCTHPNC EVKKLFERSH DGQMTDIIYK GTHEHPKPQP GRRNSAAQEE RIEKGVYNLS QAIEQTGNNN PEVPPTTEDG GEVKDDLEEE
301: EDPFTKRRRL EGSMEITTPL VKPIREPRVV VQTLSEVDIL DDGYKWRKYG QKVVRGNPNP RSYYKCTAPG CPVRKHVERA SHDPKAVITT YEGKHNHDVP
401: TSKSTNHHVI QPRFRPDETT DTISLNLGVG ISSDGPDHTS NERNQQLLIN QTHPNGVGFR FVHAAPMSYY HGSLNSGIHQ YGSRETQNET RNGGVSSLNH
501: SSYQHLVTGG SMFSVGGFDV IPFLLLFGEE NLRIQIKGVK ALETPGASKE LHRLERHLQW LTPNTGSVEK RVVPLPHLPS MVVLSKLNPS HYLNLIATIS
601: IHPSIIEGSP ASTEQEPTQT DSVITSTETP IDDEKTPVQR RSEPRLCSFT VEVRLLSGEN PVSLPTEDLG HQCPDSSPLR NLFTPSTHIK HDLTFNVAYS
701: SSRRYRFFES GDKDHLWHSR LLALVERIQR DDGVDGGIFK ETISGAAGGK RILI

Best Arabidopsis Sequence Match ( AT4G26640.2 )
(BLAST)

001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP

Arabidopsis Description

WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.