Factsheet for Bra024780.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45169	Canola	nucleus	99.59	99.59
CDY03003	Canola	nucleus	95.47	94.89
Bra026554.1-P	Field mustard	nucleus	79.63	81.47
AT2G03340.1	Thale cress	nucleus	81.48	77.19
Bra026869.1-P	Field mustard	nucleus	65.23	66.04
Bra016716.1-P	Field mustard	nucleus	62.55	65.38
Bra019697.1-P	Field mustard	nucleus	65.64	64.71
VIT_01s0011g00220.t01	Wine grape	nucleus	58.02	56.18
KRH70820	Soybean	nucleus, plastid	41.36	55.22
KRH74950	Soybean	nucleus	51.23	54.73
KRG89512	Soybean	nucleus	47.94	53.08
PGSC0003DMT400072836	Potato	nucleus	55.14	52.76
Solyc05g012770.2.1	Tomato	nucleus	54.94	52.56
KRH50544	Soybean	nucleus	47.33	52.04
Bra028707.1-P	Field mustard	nucleus	26.95	41.07
Bra021623.1-P	Field mustard	nucleus	27.37	38.0
Bra018325.1-P	Field mustard	nucleus	28.81	37.53
Bra022786.1-P	Field mustard	nucleus	27.16	34.92
Bra005104.1-P	Field mustard	nucleus	31.69	33.7
Bra017117.1-P	Field mustard	nucleus	30.86	32.4
Bra000064.1-P	Field mustard	nucleus	31.48	32.35
Bra023112.1-P	Field mustard	nucleus	25.93	30.0
Bra028971.1-P	Field mustard	nucleus	29.84	29.9
Bra005210.1-P	Field mustard	nucleus	25.1	29.83
Bra028939.1-P	Field mustard	nucleus	26.95	29.18
Bra026414.1-P	Field mustard	nucleus	31.69	28.79
Bra026438.1-P	Field mustard	nucleus	30.86	28.09
Bra019105.1-P	Field mustard	nucleus	30.45	27.98
Bra010431.1-P	Field mustard	nucleus	31.28	27.89
Bra030848.1-P	Field mustard	nucleus	11.52	27.59
Bra002828.1-P	Field mustard	nucleus	35.39	25.56
Bra013187.1-P	Field mustard	nucleus	22.22	24.16
Bra010266.1-P	Field mustard	nucleus	22.02	23.41
Bra037106.1-P	Field mustard	nucleus	18.93	21.3
Bra030847.1-P	Field mustard	nucleus	18.93	20.58
Bra019095.1-P	Field mustard	nucleus	30.25	19.5
Bra024035.1-P	Field mustard	nucleus	22.02	18.17
Bra038006.1-P	Field mustard	nucleus	15.84	11.77

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra024780	EnsemblPlants:Bra024780.1	EnsemblPlants:Bra024780.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4E7M4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000253F80E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G03340 (E=4e-126) WRKY3 | WRKY3; transcription factor

Coordinates

chrA06:+:23397022..23398954

Molecular Weight (calculated)

53468.1 Da

IEP (calculated)

8.224

GRAVY (calculated)

-0.886

Length

486 amino acids

Sequence
(BLAST)

001: MADKEEQEVE HQQKQPLTSK SSTGGSSRPT ISLPPRPFGE MFFSGGLGFS PGPMTLVSNL FSDPDELKTF SQLLAGAMAS PVAAVVATAH QTPVSSVGGS
101: GGDVDPRFKQ NRPTGLMIAQ PPAMFTVPPG LSPATLLDSP SFFGLFSPIQ GSFGMTHQQA LAQVTAQAVQ GNTSVQSQSE HPSSTQQQQE TSSEPMSQLP
201: APAQRDTVEV SVYEHRSSQP QSADKPADDG YNWRKYGQKQ VKGSDFPRSY YKCTHPACPV KKKVERSQDG QVTEIIYKGQ HSHEPPQNKT KRDNNGSSRS
301: SDVATQFQTS NTAGLNKNKR DQETSQVTTT TTEQMCEASD SEETSVEPDP KRRNMEVRVT EPVTSTQRTV TEPRIIVQTT SEVDLLDDGF RWRKYGQKVV
401: KGNPYPRSYY KCTTPGCGVR KHVERAANDP KAVVTTYEGK HNHDVPAARN SSHQLRPNNN LHNTTMDSMN QEQRVARLRL KEEQIT

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.