CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50544	Soybean	nucleus	84.97	84.39
KRH70820	Soybean	nucleus, plastid	55.13	66.48
KRH74950	Soybean	nucleus	66.06	63.74
CDY53941	Canola	nucleus	51.25	51.14
CDY33788	Canola	nucleus	51.48	51.13
CDY36419	Canola	nucleus	52.39	50.55
CDX98138	Canola	nucleus	52.16	50.11
CDY16122	Canola	nucleus	50.34	49.33
PGSC0003DMT400072836	Potato	nucleus	56.72	49.02
Solyc05g012770.2.1	Tomato	nucleus	56.49	48.82
VIT_01s0011g00220.t01	Wine grape	nucleus	55.81	48.8
CDX96873	Canola	nucleus	51.71	48.71
Bra016716.1-P	Field mustard	nucleus	51.48	48.6
CDY62213	Canola	nucleus	51.25	48.49
Bra024780.1-P	Field mustard	nucleus	53.08	47.94
Bra026554.1-P	Field mustard	nucleus	51.48	47.58
CDY45169	Canola	nucleus	52.62	47.53
Bra026869.1-P	Field mustard	nucleus	51.94	47.5
Bra019697.1-P	Field mustard	nucleus	52.62	46.86
AT2G03340.1	Thale cress	nucleus	54.67	46.78
CDY03003	Canola	nucleus	51.71	46.42
AT1G13960.1	Thale cress	nucleus	53.08	45.33
CDY37191	Canola	nucleus	49.66	44.86
KRH01236	Soybean	nucleus	48.97	41.35
KRH44949	Soybean	nucleus	49.2	41.3
KRH67621	Soybean	nucleus	32.57	31.92
CDY72350	Canola	nucleus	10.48	31.72
KRH55277	Soybean	nucleus	15.26	31.6
KRG95903	Soybean	nucleus	33.71	31.42
KRH34225	Soybean	nucleus	13.67	31.25
KRH49522	Soybean	extracellular, plasma membrane	16.17	28.17
KRG98195	Soybean	nucleus	34.62	28.04
KRH30155	Soybean	nucleus	34.62	27.74
KRH17125	Soybean	nucleus	36.22	27.65
KRH72765	Soybean	nucleus	35.99	27.24
KRH76058	Soybean	nucleus	31.21	27.02
KRH65526	Soybean	nucleus	31.21	27.02
KRH03056	Soybean	nucleus	7.06	26.27
CDY62292	Canola	nucleus	12.3	25.96
KRH00362	Soybean	nucleus	31.21	25.32
KRH40825	Soybean	nucleus	30.98	25.05
Bra030848.1-P	Field mustard	nucleus	11.39	24.63
KRH26105	Soybean	nucleus	26.2	24.63
KRH46302	Soybean	nucleus	31.89	24.26
KRH54934	Soybean	nucleus	25.97	24.26
KRG98564	Soybean	nucleus	31.44	23.92
CDY62293	Canola	nucleus	10.93	23.65
KRH73864	Soybean	nucleus	31.44	23.47
KRH14276	Soybean	nucleus	31.21	23.42
KRH14103	Soybean	nucleus	26.2	22.64
KRH74020	Soybean	nucleus	25.74	22.29
KRH03057	Soybean	nucleus	18.68	21.24
KRH72303	Soybean	nucleus	25.51	21.01
KRH34226	Soybean	nucleus	15.72	20.54
KRH62550	Soybean	nucleus	33.71	19.45
KRH40304	Soybean	nucleus	32.12	19.21
KRH00919	Soybean	nucleus	32.12	18.95
KRH56379	Soybean	nucleus	33.26	18.81
KRH34224	Soybean	nucleus	13.9	16.62

Protein Annotations

EntrezGene:100784936	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02012214	EnsemblPlantsGene:GLYMA_20G028000	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1NDJ8	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlants:KRG89512	ProteinID:KRG89512	ProteinID:KRG89512.1	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000233DA96	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:3206929..3211641

Molecular Weight (calculated)

48011.6 Da

IEP (calculated)

8.359

GRAVY (calculated)

-0.884

Length

439 amino acids

Sequence
(BLAST)

001: MVDGGKGEGG GEQASPPSTA ARHGTTLRPR ASVESVFSGG YSPGPMALLS NFYGDGDECK SFSELLAGAM VDPTAPSPMP TTTFALPPGF IDSPSQGQFG
101: ITHQQMLAQI SSQAVQTHSE HPFSISAVSA TSSCAAQQLI PPSMPDSKVK ESLDYSHSEQ KLQSSVNVDN KPNNDGYNWR KYGQKHVKGS DFSRSYYKCT
201: RPNCPVKKKL ERSLEGHVTA IIYKGEHNHQ RPHRSKIVKE TQTSNENSVS KMDLGSSQAT GEHGSGTSDS EEVDDHETEA DEKNDEPDAK RRNTEARIQD
301: PATLHRSVAE PRIIVQTTSE VNLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTQGCKVRKH VERASMDPKA VITTYEGKHN HDVPAAKTNS HTLANNSASQ
401: LKAQKFAIPD VKHSSSSRGV TGNEQRPVAS LRLKEEQIT

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.