Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14276 | Soybean | nucleus | 81.13 | 29.4 |
| KRH73864 | Soybean | nucleus | 80.66 | 29.08 |
| KRH46302 | Soybean | nucleus | 72.17 | 26.52 |
| KRG98564 | Soybean | nucleus | 71.7 | 26.34 |
| KRH03056 | Soybean | nucleus | 14.15 | 25.42 |
| KRH34225 | Soybean | nucleus | 20.28 | 22.4 |
| KRH70820 | Soybean | nucleus, plastid | 32.08 | 18.68 |
| KRH34226 | Soybean | nucleus | 25.0 | 15.77 |
| KRH76058 | Soybean | nucleus | 36.79 | 15.38 |
| KRG98195 | Soybean | nucleus | 39.15 | 15.31 |
| KRG89512 | Soybean | nucleus | 31.6 | 15.26 |
| KRH74950 | Soybean | nucleus | 32.55 | 15.16 |
| KRH65526 | Soybean | nucleus | 35.85 | 14.99 |
| KRH30155 | Soybean | nucleus | 38.68 | 14.96 |
| KRH50544 | Soybean | nucleus | 31.13 | 14.93 |
| KRH49522 | Soybean | extracellular, plasma membrane | 17.45 | 14.68 |
| KRH01236 | Soybean | nucleus | 35.85 | 14.62 |
| KRH44949 | Soybean | nucleus | 35.85 | 14.53 |
| KRH00362 | Soybean | nucleus | 36.79 | 14.42 |
| KRH17125 | Soybean | nucleus | 38.68 | 14.26 |
| KRH40825 | Soybean | nucleus | 36.32 | 14.18 |
| KRH72765 | Soybean | nucleus | 38.21 | 13.97 |
| KRH34224 | Soybean | nucleus | 24.06 | 13.9 |
| KRH74020 | Soybean | nucleus | 31.6 | 13.21 |
| KRH14103 | Soybean | nucleus | 30.66 | 12.8 |
| KRH67621 | Soybean | nucleus | 24.53 | 11.61 |
| KRG95903 | Soybean | nucleus | 25.47 | 11.46 |
| KRH54934 | Soybean | nucleus | 25.0 | 11.28 |
| KRH26105 | Soybean | nucleus | 24.53 | 11.13 |
| KRH62550 | Soybean | nucleus | 39.62 | 11.04 |
| KRH56379 | Soybean | nucleus | 39.15 | 10.7 |
| KRH72303 | Soybean | nucleus | 24.06 | 9.57 |
| KRH40304 | Soybean | nucleus | 32.08 | 9.26 |
| KRH00919 | Soybean | nucleus | 31.6 | 9.01 |
| KRH03057 | Soybean | nucleus | 10.38 | 5.7 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0R0JL93 | EMBL:ACUP02003944 | EnsemblPlantsGene:GLYMA_06G242200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| EnsemblPlants:KRH55277 | ProteinID:KRH55277 | ProteinID:KRH55277.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0006ED5E54 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
Description
hypothetical protein
Coordinates
chr6:-:40185712..40189447
Molecular Weight (calculated)
23296.2 Da
IEP (calculated)
8.125
GRAVY (calculated)
-0.544
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MINIVSRNEC RDDDAKNWIN SAYNLNISLV YIYAALEVAR FGCTLSEVDI LDDGYCWRKY GQKVVRGNPN PRSYYKCTNA GCPVRKHVER ASHDPKAVIT
101: TYEGKHNHDV PAARNSSHDM AVPAVAAGGQ TRTKLEESDT ISLDLGMGIT SAAEHSSSNL KFVHTTSTPV YFGVLNNSSN SYGSRDNRSD GPSLNRSSYP
201: CPQSMGRILM GP
101: TYEGKHNHDV PAARNSSHDM AVPAVAAGGQ TRTKLEESDT ISLDLGMGIT SAAEHSSSNL KFVHTTSTPV YFGVLNNSSN SYGSRDNRSD GPSLNRSSYP
201: CPQSMGRILM GP
001: MILLPEPSPT TGSLFKPRPV HISASSSSYT GRGFHQNTFT EQKSSEFEFR PPASNMVYAE LGKIRSEPPV HFQGQGHGSS HSPSSISDAA GSSSELSRPT
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.