CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95903	Soybean	nucleus	94.2	89.6
VIT_08s0040g03070.t01	Wine grape	nucleus	66.74	62.68
GSMUA_Achr1P17160_001	Banana	nucleus	42.19	45.99
Bra023112.1-P	Field mustard	nucleus	42.86	45.71
AT2G37260.1	Thale cress	nucleus	43.3	45.22
PGSC0003DMT400028530	Potato	nucleus	47.1	45.18
Solyc10g084380.1.1	Tomato	nucleus	42.41	45.02
CDX74976	Canola	nucleus	39.73	44.72
Bra005210.1-P	Field mustard	nucleus	40.62	44.5
CDX91348	Canola	nucleus	39.73	44.28
CDY46769	Canola	nucleus	29.69	41.18
CDY46768	Canola	nucleus	29.69	41.18
CDX79729	Canola	nucleus	29.46	40.99
GSMUA_Achr4P16840_001	Banana	nucleus	37.05	39.43
KRH70820	Soybean	nucleus, plastid	27.68	34.07
KRG89512	Soybean	nucleus	31.92	32.57
KRH50544	Soybean	nucleus	31.92	32.35
KRH74950	Soybean	nucleus	32.37	31.87
KRH49522	Soybean	extracellular, plasma membrane	16.29	28.97
KRG98195	Soybean	nucleus	34.15	28.23
KRH01236	Soybean	nucleus	32.59	28.08
KRH44949	Soybean	nucleus	32.59	27.92
KRH17125	Soybean	nucleus	35.49	27.65
KRH34225	Soybean	nucleus	11.83	27.6
KRH72765	Soybean	nucleus	35.49	27.41
KRH30155	Soybean	nucleus	33.48	27.37
KRH65526	Soybean	nucleus	28.57	25.25
KRH00362	Soybean	nucleus	30.13	24.95
KRH40825	Soybean	nucleus	30.13	24.86
KRH76058	Soybean	nucleus	28.12	24.85
KRH55277	Soybean	nucleus	11.61	24.53
KRH14276	Soybean	nucleus	30.36	23.25
KRH73864	Soybean	nucleus	30.36	23.13
KRH46302	Soybean	nucleus	29.69	23.05
KRG98564	Soybean	nucleus	29.69	23.05
KRH26105	Soybean	nucleus	21.65	20.77
KRH54934	Soybean	nucleus	20.54	19.57
KRH14103	Soybean	nucleus	21.65	19.09
KRH40304	Soybean	nucleus	31.03	18.94
KRH62550	Soybean	nucleus	31.92	18.79
KRH74020	Soybean	nucleus	21.21	18.74
KRH03056	Soybean	nucleus	4.91	18.64
KRH00919	Soybean	nucleus	30.8	18.55
KRH03057	Soybean	nucleus	15.85	18.39
KRH56379	Soybean	nucleus	31.7	18.3
KRH72303	Soybean	nucleus	21.21	17.82
KRH34226	Soybean	nucleus	12.5	16.67
KRH34224	Soybean	nucleus	10.27	12.53

Protein Annotations

EntrezGene:100127379	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02002069	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G176600
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:K7KFQ7	EnsemblPlants:KRH67621	ProteinID:KRH67621	ProteinID:KRH67621.1	ProteinID:KRH67622.1
ProteinID:KRH67623.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF50	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002336F80	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	:	:

Description

hypothetical protein

Coordinates

chr3:-:38951309..38955088

Molecular Weight (calculated)

49581.6 Da

IEP (calculated)

8.360

GRAVY (calculated)

-0.875

Length

448 amino acids

Sequence
(BLAST)

001: MDIKEAQRVV ISKPVASRPT CSTFKSFSEL LAGAINVSPA IESSPTTVSA IRPKTVRFKP AMNQPPAGFV SSQADTFGAA LDNSSDMSPK LDTKQSLIYK
101: PTAKLVSKTT VSLLANMGNC STNTSSNLDQ SITPQTETNY QSSEPSKMVQ QNIEEDQKAL TSSVNCDRPS YDGYNWRKYG QKQVKGSEYP RSYYKCTHPN
201: CPVKKKVERS FDGNIAEIVY KGEHNHSKPQ LHKRNSAAGT QGSGVMSDGM VQDMWSNSHS ERNEGNEVRI ENTGLSMHSD YYVKVPQPND SSLNIGATNA
301: GGGSMENSCG LSGEYEEGSK GFEAQEDEHR SKRRKNENQS NEAALSEEGL VEPRIVMQSF TDSEVLGDGF RWRKYGQKVV KGNPYPRSYF RCTNIMCNVR
401: KHVERAIDDP RSFVTTYEGK HNHEMPLKNT GTVASERDSQ ASLSKDKP

Best Arabidopsis Sequence Match ( AT2G37260.1 )
(BLAST)

001: MEVNDGERVV IAKPVASRPS SSSGFRTFTE LLTDSVTVSP QTTCHEIVDA AIRPKTLRFN QPVAASVSCP RAEVKGIGNG MSCDDDSDSR NYVVYKPKAK
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI

Arabidopsis Description

WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.