CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44949	Soybean	nucleus	96.54	95.98
VIT_14s0108g01280.t01	Wine grape	nucleus	65.19	64.33
KRH70820	Soybean	nucleus, plastid	39.62	56.59
KRH74950	Soybean	nucleus	48.85	55.82
GSMUA_Achr7P26450_001	Banana	nucleus	48.46	52.72
GSMUA_Achr4P07230_001	Banana	nucleus	47.5	52.55
GSMUA_Achr4P14270_001	Banana	nucleus	45.38	52.21
GSMUA_Achr10P...	Banana	nucleus	45.77	51.4
KRH50544	Soybean	nucleus	43.27	50.91
GSMUA_Achr6P16760_001	Banana	nucleus	46.92	50.62
GSMUA_Achr7P00610_001	Banana	nucleus	45.96	49.59
KRG89512	Soybean	nucleus	41.35	48.97
TraesCS5B01G108500.1	Wheat	nucleus	46.15	48.48
EES16036	Sorghum	nucleus	46.15	48.39
HORVU5Hr1G028340.1	Barley	nucleus	45.58	48.17
TraesCS5D01G116100.1	Wheat	nucleus	45.96	48.09
TraesCS5A01G104900.1	Wheat	nucleus	45.96	48.09
EER94675	Sorghum	nucleus	45.38	47.39
Zm00001d035323_P001	Maize	nucleus	44.62	46.77
Zm00001d041740_P001	Maize	nucleus	44.42	46.76
Os12t0507300-00	Rice	nucleus	35.58	46.37
AT3G01080.2	Thale cress	nucleus	40.96	46.2
PGSC0003DMT400003637	Potato	nucleus	40.0	46.12
TraesCS4A01G162500.1	Wheat	nucleus	43.08	45.9
Zm00001d047309_P001	Maize	nucleus	43.85	45.88
Solyc02g088340.2.1	Tomato	nucleus	40.58	45.87
Solyc03g104810.2.1	Tomato	nucleus	42.69	45.68
TraesCS4D01G151700.1	Wheat	nucleus	42.31	45.36
TraesCS4B01G165900.2	Wheat	nucleus	42.31	45.17
PGSC0003DMT400014220	Potato	nucleus	44.23	44.57
CDX74281	Canola	nucleus	38.65	44.57
Zm00001d029564_P001	Maize	nucleus	30.58	42.18
HORVU4Hr1G048400.1	Barley	mitochondrion	41.54	40.83
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	28.65	39.95
KRH34225	Soybean	nucleus	13.65	36.98
KRH55277	Soybean	nucleus	14.62	35.85
Os07t0596900-00	Rice	nucleus	29.42	35.42
KRH49522	Soybean	extracellular, plasma membrane	16.54	34.13
TraesCS2B01G209200.1	Wheat	nucleus	29.42	32.69
KRH67621	Soybean	nucleus	28.08	32.59
TraesCS2A01G182700.1	Wheat	nucleus	29.04	32.47
TraesCS2D01G190500.1	Wheat	nucleus	28.46	32.31
KRG95903	Soybean	nucleus	29.23	32.27
HORVU2Hr1G034420.2	Barley	nucleus	27.5	31.92
KRG98195	Soybean	nucleus	31.54	30.26
KRH00362	Soybean	nucleus	31.35	30.13
KRH17125	Soybean	nucleus	33.08	29.91
KRH40825	Soybean	nucleus	31.15	29.83
KRH30155	Soybean	nucleus	31.35	29.74
KRH72765	Soybean	nucleus	33.08	29.66
KRH76058	Soybean	nucleus	28.65	29.39
KRH65526	Soybean	nucleus	28.46	29.19
KRH46302	Soybean	nucleus	31.35	28.25
KRG98564	Soybean	nucleus	30.96	27.9
KRH73864	Soybean	nucleus	31.35	27.72
KRH14276	Soybean	nucleus	30.77	27.35
KRH03056	Soybean	nucleus	6.15	27.12
KRH26105	Soybean	nucleus	22.69	25.27
KRH54934	Soybean	nucleus	21.92	24.26
KRH14103	Soybean	nucleus	23.08	23.62
KRH74020	Soybean	nucleus	22.69	23.27
KRH03057	Soybean	nucleus	16.73	22.54
KRH62550	Soybean	nucleus	32.88	22.47
KRH34226	Soybean	nucleus	14.23	22.02
KRH56379	Soybean	nucleus	32.69	21.91
KRH72303	Soybean	nucleus	21.92	21.39
KRH40304	Soybean	nucleus	29.62	20.98
KRH00919	Soybean	nucleus	29.62	20.7
KRH34224	Soybean	nucleus	12.12	17.17

Protein Annotations

EntrezGene:100796679	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02011508	EnsemblPlantsGene:GLYMA_18G263400	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1N4H1	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlants:KRH01236	ProteinID:KRH01236	ProteinID:KRH01236.1	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002955A33	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:54874974..54881413

Molecular Weight (calculated)

56562.8 Da

IEP (calculated)

7.936

GRAVY (calculated)

-0.787

Length

520 amino acids

Sequence
(BLAST)

001: MYTPNADSGT APHPRPTITL PPRPSAEAFF SAAGGASPGP MTLVSSFFGS DAAADCRSFS QLLAGAMASP MAFSAAAASA ADNSGKDDDG PHKGFKQSRP
101: MNLVIARSPV FTVPPGLSPS GFLNSPGFFS PQSPFGMSHQ QALAQVTAQA VLAQSHMHMQ ADYQMPSVTA PTEPPVQQLS FALNEASEQQ VVSCVSEPRN
201: AQLEAPELSQ ADKKYQPSSQ AIDKPADDGY NWRKYGQKQV KGSEYPRSYY KCTHLNCVVK KKVERAPDGH ITEIIYKGQH NHEKPQANRR AKDNSDSNGN
301: VTVQPKSESN SQGWVGQLNK LSENIPNSSV PESDQTSNQG APRQLLPGSN ESEEVGIVDN REEADDGEPN PKRRNTDVGV SEVPLSQKTV TEPKIIVQTR
401: SEVDLLDDGY RWRKYGQKVV KGNPHPRSYY KCTSAGCNVR KHVERASTDP KAVITTYEGK HNHDVPAARN SSHNTASSNS MPLKPHNVVP EKHPLLKDKD
501: FGGNDQRPVH LRLKEEQIIV

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.