Factsheet for HORVU4Hr1G048400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G162500.1	Wheat	nucleus	85.63	92.83
TraesCS4D01G151700.1	Wheat	nucleus	84.88	92.58
TraesCS4B01G165900.2	Wheat	nucleus	84.12	91.38
EER94675	Sorghum	nucleus	66.73	70.88
Zm00001d047309_P001	Maize	nucleus	63.52	67.61
Zm00001d029564_P001	Maize	nucleus	44.42	62.33
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	41.97	59.52
HORVU5Hr1G028340.1	Barley	nucleus	43.86	47.15
GSMUA_Achr6P16760_001	Banana	nucleus	42.16	46.27
GSMUA_Achr4P07230_001	Banana	nucleus	41.02	46.17
GSMUA_Achr10P...	Banana	nucleus	40.08	45.79
GSMUA_Achr7P26450_001	Banana	nucleus	40.83	45.19
GSMUA_Achr4P14270_001	Banana	nucleus	37.05	43.36
VIT_14s0108g01280.t01	Wine grape	nucleus	42.72	42.88
KRH01236	Soybean	nucleus	40.83	41.54
KRH44949	Soybean	nucleus	41.02	41.49
AT3G01080.2	Thale cress	nucleus	34.22	39.26
CDX74281	Canola	nucleus	31.19	36.59
PGSC0003DMT400003637	Potato	nucleus	30.06	35.26
Solyc02g088340.2.1	Tomato	nucleus	30.25	34.78
HORVU2Hr1G034420.2	Barley	nucleus	29.11	34.38
Solyc03g104810.2.1	Tomato	nucleus	30.43	33.13
PGSC0003DMT400014220	Potato	nucleus	31.95	32.75
HORVU7Hr1G049130.1	Barley	nucleus, plastid	12.48	26.94
HORVU1Hr1G070250.2	Barley	nucleus, plastid	25.33	26.17
HORVU3Hr1G088200.4	Barley	nucleus, plastid	27.98	24.71
HORVU5Hr1G072020.1	Barley	nucleus	28.73	22.49
HORVU0Hr1G004890.10	Barley	nucleus	25.14	22.09
HORVU7Hr1G066670.4	Barley	nucleus	24.01	21.9
HORVU2Hr1G036320.1	Barley	nucleus	24.57	21.14

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287NZB4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU4Hr1G048400	EnsemblPlants:HORVU4Hr1G048400.1	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF18	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B4616CE	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:390704417..390734778

Molecular Weight (calculated)

56858.0 Da

IEP (calculated)

8.607

GRAVY (calculated)

-0.628

Length

529 amino acids

Sequence
(BLAST)

001: RLHPRLPSRG LAVSLVPHKP RKKALPKCSA HHLSFLMAAQ EASAGGGEDA RRALATPALS LPPRSAVESF FASGATAASF AETSPGPFTL TAALFQDMPS
101: SAFHGSFTQL LVGAMGSPAA PPAGGPSPPS PFAVPPGLCP TAVLGFPSLF SPTGNFEMSH QQALAQVTAQ AFHSQYTVDS QADYSLPFSS EATSALTSQF
201: INSSANVTSM KETATPPLRT VHDYLKTYEV SQGFQTSALT VDKPVDDGYN WRKYGQKAVK GGEYPRSYYK CTQASCPVKK RVEHSAYGQI TQIIYRGQHN
301: HQRPPKRRSK DGGNLLNEDD FPENRDALTR SERGSQDHSG KVEVSNDGIA GPSMSKRRDG GDQSSGSSDR EEEDNDEAGD DNGDAGIVNA NKRQVPAPAQ
401: RIIVQTTSEI DLLDDGYRWR KYGQKVVKGN PHPRSYYKCT YQGCDVKKHI ERCSQDPTSV ITTYEGKHSH DVPVARSSVA AAASANASSS ISLLHRGQKA
501: ASSGQRVLPR AALHTSDSSL QLKEENEIT

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.