Factsheet for GSMUA_Achr6P16760_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	68.67	71.49
GSMUA_Achr7P26450_001	Banana	nucleus	61.0	61.51
GSMUA_Achr4P14270_001	Banana	nucleus	56.85	60.62
GSMUA_Achr4P07230_001	Banana	nucleus	57.88	59.36
VIT_14s0108g01280.t01	Wine grape	nucleus	55.19	50.47
Os12t0507300-00	Rice	nucleus	40.25	48.62
HORVU5Hr1G028340.1	Barley	nucleus	48.76	47.76
EES16036	Sorghum	nucleus	48.96	47.58
TraesCS5D01G116100.1	Wheat	nucleus	48.76	47.28
TraesCS5A01G104900.1	Wheat	nucleus	48.76	47.28
Zm00001d041740_P001	Maize	nucleus	48.34	47.17
TraesCS5B01G108500.1	Wheat	nucleus	48.34	47.07
EER94675	Sorghum	nucleus	48.55	46.99
Zm00001d035323_P001	Maize	nucleus	48.34	46.98
KRH01236	Soybean	nucleus	50.62	46.92
KRH44949	Soybean	nucleus	50.21	46.27
TraesCS4B01G165900.2	Wheat	nucleus	46.47	46.0
TraesCS4D01G151700.1	Wheat	nucleus	46.27	45.98
GSMUA_Achr7P00610_001	Banana	nucleus	45.85	45.85
TraesCS4A01G162500.1	Wheat	nucleus	46.27	45.7
Zm00001d047309_P001	Maize	nucleus	46.68	45.27
AT3G01080.2	Thale cress	nucleus	40.87	42.73
HORVU4Hr1G048400.1	Barley	mitochondrion	46.27	42.16
Zm00001d029564_P001	Maize	nucleus	32.16	41.11
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	31.74	41.02
PGSC0003DMT400003637	Potato	nucleus	37.97	40.58
Solyc02g088340.2.1	Tomato	nucleus	38.38	40.22
CDX74281	Canola	nucleus	37.55	40.13
Solyc03g104810.2.1	Tomato	nucleus	40.25	39.92
PGSC0003DMT400014220	Potato	nucleus	41.91	39.15
GSMUA_Achr3P09940_001	Banana	nucleus	28.01	36.89
GSMUA_Achr7P25840_001	Banana	nucleus	18.05	35.22
Os07t0596900-00	Rice	nucleus	29.88	33.33
TraesCS2D01G190500.1	Wheat	nucleus	30.5	32.1
TraesCS2B01G209200.1	Wheat	nucleus	31.12	32.05
TraesCS2A01G182700.1	Wheat	nucleus	30.71	31.83
HORVU2Hr1G034420.2	Barley	nucleus	29.46	31.7
GSMUA_Achr4P13970_001	Banana	nucleus	33.61	31.58
GSMUA_Achr11P...	Banana	nucleus	29.88	30.9
GSMUA_AchrUn_...	Banana	nucleus	28.84	30.35
GSMUA_Achr1P17160_001	Banana	nucleus	25.31	29.68
GSMUA_Achr6P32720_001	Banana	nucleus	28.01	29.61
GSMUA_Achr10P...	Banana	nucleus	28.42	28.96
GSMUA_Achr8P01790_001	Banana	nucleus	32.37	27.37
GSMUA_Achr6P03500_001	Banana	nucleus	29.05	27.18
GSMUA_Achr5P23900_001	Banana	nucleus	31.74	27.08
GSMUA_Achr3P29850_001	Banana	nucleus	31.95	26.74
GSMUA_Achr4P16840_001	Banana	nucleus	22.41	25.65
GSMUA_Achr5P04150_001	Banana	nucleus	33.2	25.28
GSMUA_Achr11P...	Banana	nucleus	33.2	24.73
GSMUA_Achr4P01600_001	Banana	nucleus	33.82	24.47
GSMUA_Achr9P19580_001	Banana	nucleus	28.01	24.19

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr6G16760_001	EnsemblPlants:GSMUA_Achr6P16760_001	EnsemblPlants:GSMUA_Achr6T16760_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0T7M4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI00029585EB	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Probable WRKY transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G16760_001]

Coordinates

chr6:+:11186239..11190611

Molecular Weight (calculated)

52933.1 Da

IEP (calculated)

7.904

GRAVY (calculated)

-0.807

Length

482 amino acids

Sequence
(BLAST)

001: MLPPRSSMAS LFHEGGGGAS EVSPGPLTLV SSFFADDPET ECRSFTQLLV GAMNSPVAAA RRPAGISWEQ EKQNRPASLT VSQPQAFTIA PGLSPSSLLD
101: SPGFFSSGLG TFVMSHQEAL AQVTAQASQS QFKMLSQAEY PSEFVTTPPS SQQLIQETPT RKRNNSVFES AEGSLSDQIS HPTAIVVDKP ASDGYNWRKY
201: GQKMVRSSEY PRSYYKCSHP NCPVKKKVEH SADGQITEII YKGQHNHQRP TPNKRFKEGD SFLSGSNEIT ESLDNPSTPE SGFHGNHGNL RRSNGMTAAT
301: SASKRDREFD YGAPEQLSGS TDREEVSETQ TDGRDNHDAD AKRMNVSASS QTTSAEPKIV VQTTSEVDLL DDGYRWRKYG QKVVKGNPNP RSYYKCTYLG
401: CNVRKHVERA PTDPKSVITT YEGKHNHDVP TSRNSSRNLA CAGVASSIVQ SNSQPSLRTT NFRNNDQQPV AVLRLKEERE IT

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.