Factsheet for Zm00001d041740_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16036	Sorghum	nucleus	93.52	93.15
Zm00001d035323_P001	Maize	nucleus	92.92	92.54
TraesCS5A01G104900.1	Wheat	nucleus	79.15	78.67
HORVU5Hr1G028340.1	Barley	nucleus	78.34	78.66
TraesCS5D01G116100.1	Wheat	nucleus	78.74	78.27
TraesCS5B01G108500.1	Wheat	nucleus	78.34	78.18
Os12t0507300-00	Rice	nucleus	61.54	76.19
GSMUA_Achr4P14270_001	Banana	nucleus	46.36	50.66
GSMUA_Achr6P16760_001	Banana	nucleus	47.17	48.34
GSMUA_Achr7P26450_001	Banana	nucleus	46.36	47.91
GSMUA_Achr4P07230_001	Banana	nucleus	45.34	47.66
Zm00001d047309_P001	Maize	nucleus	47.77	47.48
GSMUA_Achr10P...	Banana	nucleus	43.72	46.65
KRH44949	Soybean	nucleus	47.37	44.74
KRH01236	Soybean	nucleus	46.76	44.42
Zm00001d029564_P001	Maize	nucleus	33.4	43.77
VIT_14s0108g01280.t01	Wine grape	nucleus	46.36	43.45
AT3G01080.2	Thale cress	nucleus	38.66	41.43
PGSC0003DMT400003637	Potato	nucleus	35.43	38.8
Solyc02g088340.2.1	Tomato	nucleus	35.83	38.48
CDX74281	Canola	nucleus	34.82	38.14
Solyc03g104810.2.1	Tomato	nucleus	36.23	36.83
PGSC0003DMT400014220	Potato	nucleus	37.85	36.24
Zm00001d034084_P001	Maize	nucleus	27.73	32.16
Zm00001d038023_P001	Maize	nucleus	30.57	30.88
Zm00001d010399_P001	Maize	nucleus	30.97	30.72
Zm00001d043025_P001	Maize	nucleus	32.79	29.19
Zm00001d012482_P001	Maize	nucleus	31.98	26.64
Zm00001d038451_P001	Maize	nucleus	29.15	25.85
Zm00001d006702_P001	Maize	nucleus	30.77	24.92
Zm00001d021947_P002	Maize	nucleus	30.77	24.8
Zm00001d025669_P001	Maize	nucleus	32.19	23.98
Zm00001d050023_P001	Maize	extracellular	26.32	22.97
Zm00001d003331_P001	Maize	nucleus	32.39	22.76
Zm00001d052847_P001	Maize	nucleus	30.36	20.58
Zm00001d006001_P006	Maize	nucleus	23.68	20.38
Zm00001d020881_P002	Maize	nucleus	23.68	19.86

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:B6SYC5	EMBL:EU957740	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM33581.1
ProteinID:ONM33582.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF55	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000182C911	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d041740	EnsemblPlants:Zm00001d041740_P001
EnsemblPlants:Zm00001d041740_T001	SEG:seg	:	:	:	:

Description

WRKY-transcription factor 58SPF1-like DNA-binding protein

Coordinates

chr3:-:135595517..135603519

Molecular Weight (calculated)

52531.6 Da

IEP (calculated)

7.070

GRAVY (calculated)

-0.766

Length

494 amino acids

Sequence
(BLAST)

001: MSARPPPPPR PRLALPPRST AESLFTGAGD ASPGPLTLAS ALFPSDADGG GGPGGASSSA AGAATFTQLL TGSLAPPPQQ QQHEAQTGGG GVARAGPALS
101: VAPPASSFAG ASLFTVPPGL SPSGLLDSPG LLFSPAMGGF GMSHQQALAQ VTAQATHSPL RMFDHLEQPS FSTAATTSGA LHHMNSAASM AGISDMTMAT
201: ANNENPSFQS AEASQRYQVN APVDKPADDG YNWRKYGQKV VKGSDCPRSY YKCTHPNCPV KKKVEHAEDG QISEIIYKGK HNHQRPPNKR AKDGNSSAFD
301: QNEQSNDTTS GLSGAKRDQD NIYGMSEQAY GLSDGDDMDD GESRPHEVDD ADNESKRRNI QISSQRTLSE SKIIVQTTSE VDLLDDGYRW RKYGQKVVKG
401: NSHPRSYYKC TFAGCNVRKH IERASSDPRA VITTYEGKHD HEPPVGRGNN QNAGIPQQKE GQNNISSNQA SLSRPDFSNA NQMPIGILQF KSEQ

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.