Factsheet for Zm00001d047309_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94675	Sorghum	nucleus	91.35	91.16
Zm00001d029564_P001	Maize	nucleus	63.78	84.08
TraesCS4A01G162500.1	Wheat	nucleus	72.23	73.57
TraesCS4D01G151700.1	Wheat	nucleus	71.23	72.99
TraesCS4B01G165900.2	Wheat	nucleus	70.42	71.87
HORVU4Hr1G048400.1	Barley	mitochondrion	67.61	63.52
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	46.48	61.93
Zm00001d035323_P001	Maize	nucleus	49.09	49.19
GSMUA_Achr10P...	Banana	nucleus	44.87	48.16
Zm00001d041740_P001	Maize	nucleus	47.48	47.77
GSMUA_Achr4P14270_001	Banana	nucleus	42.86	47.12
GSMUA_Achr7P26450_001	Banana	nucleus	45.07	46.86
GSMUA_Achr6P16760_001	Banana	nucleus	45.27	46.68
GSMUA_Achr4P07230_001	Banana	nucleus	44.06	46.6
KRH44949	Soybean	nucleus	46.28	43.98
KRH01236	Soybean	nucleus	45.88	43.85
VIT_14s0108g01280.t01	Wine grape	nucleus	45.67	43.07
AT3G01080.2	Thale cress	nucleus	38.43	41.43
CDX74281	Canola	nucleus	35.81	39.47
PGSC0003DMT400003637	Potato	nucleus	33.4	36.81
Solyc02g088340.2.1	Tomato	nucleus	33.2	35.87
Solyc03g104810.2.1	Tomato	nucleus	33.8	34.57
PGSC0003DMT400014220	Potato	nucleus	35.41	34.11
Zm00001d038023_P001	Maize	nucleus	29.38	29.86
Zm00001d010399_P001	Maize	nucleus	29.18	29.12
Zm00001d034084_P001	Maize	nucleus	24.55	28.64
Zm00001d043025_P001	Maize	nucleus	28.57	25.59
Zm00001d012482_P001	Maize	nucleus	28.57	23.95
Zm00001d050023_P001	Maize	extracellular	26.16	22.97
Zm00001d038451_P001	Maize	nucleus	25.35	22.62
Zm00001d021947_P002	Maize	nucleus	27.36	22.19
Zm00001d006702_P001	Maize	nucleus	26.96	21.97
Zm00001d025669_P001	Maize	nucleus	29.18	21.87
Zm00001d003331_P001	Maize	nucleus	30.18	21.34
Zm00001d052847_P001	Maize	nucleus	29.58	20.16
Zm00001d006001_P006	Maize	nucleus	20.52	17.77
Zm00001d020881_P002	Maize	nucleus	20.93	17.66

Protein Annotations

EntrezGene:103639063	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQL06145.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K7VL66
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF18	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000182C7EA	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d047309	EnsemblPlants:Zm00001d047309_P001	EnsemblPlants:Zm00001d047309_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 61Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr9:+:126274526..126281014

Molecular Weight (calculated)

52592.3 Da

IEP (calculated)

7.238

GRAVY (calculated)

-0.746

Length

497 amino acids

Sequence
(BLAST)

001: MAAREASAPA PASPHAGDGP GRPPRPTLAL PPRSAVESLF ATGASSSAGA AETSPGPLTL AAALFPDASS PAFHGSFTQL LVGAIGSPAV PSPPSPFAVP
101: PGLSPATLFG SPGLFSPTGS FEMSHQQALA QVTAQAVHSQ YNMINHTDYS IPFSSTTAPA LITAQHANSS ANVASAQEKP ALPSHAGNSN IESNEVSQGL
201: KTSAPTFDKP ADDGYNWRKY GQKAVKGGEY PRSYYKCTHT SCPVKKKVER SAEGHITQII YRGQHNHQRP PKRRSKDGGG PLNEADVLHE NEDISTRSEP
301: GSQEHSGKHE GSNDGILGPS VSRRGGGDEQ LSGSSDSDEE QDDEQRAGDE DPGYANANKR HVPTPAQRII VQTNSEVDLL DDGYRWRKYG QKVVKGNPYP
401: RSYYRCTYQG CDVKKHIERS SQDPKAVITT YEGKHSHDVP AVRNGSHAAA NANGSSSTSL PVPHRVHSSA SSSRRAAELQ SASSASSMLL KEENEIT

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.