Factsheet for TraesCS4A01G162500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G151700.1	Wheat	nucleus	97.34	97.94
TraesCS4B01G165900.2	Wheat	nucleus	96.11	96.3
HORVU4Hr1G048400.1	Barley	mitochondrion	92.83	85.63
EER94675	Sorghum	nucleus	76.23	74.7
Zm00001d047309_P001	Maize	nucleus	73.57	72.23
Zm00001d029564_P001	Maize	nucleus	52.05	67.37
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	47.13	61.66
TraesCS5A01G104900.1	Wheat	nucleus	48.77	47.89
GSMUA_Achr4P07230_001	Banana	nucleus	45.9	47.66
GSMUA_Achr10P...	Banana	nucleus	44.47	46.87
GSMUA_Achr6P16760_001	Banana	nucleus	45.7	46.27
GSMUA_Achr7P26450_001	Banana	nucleus	45.08	46.03
GSMUA_Achr4P14270_001	Banana	nucleus	41.6	44.91
VIT_14s0108g01280.t01	Wine grape	nucleus	47.13	43.64
KRH01236	Soybean	nucleus	45.9	43.08
KRH44949	Soybean	nucleus	46.11	43.02
AT3G01080.2	Thale cress	nucleus	38.52	40.78
CDX74281	Canola	nucleus	35.25	38.14
TraesCS2A01G182700.1	Wheat	nucleus	34.43	36.13
PGSC0003DMT400003637	Potato	nucleus	32.99	35.7
Solyc02g088340.2.1	Tomato	nucleus	32.99	35.0
Solyc03g104810.2.1	Tomato	nucleus	33.61	33.74
PGSC0003DMT400014220	Potato	nucleus	35.66	33.72
TraesCS1A01G070400.1	Wheat	nucleus	27.87	30.91
TraesCS5A01G396800.1	Wheat	nucleus	26.84	30.9
TraesCS1A01G298600.1	Wheat	nucleus, plastid	27.66	26.73
TraesCS3A01G347500.1	Wheat	nucleus	30.12	26.16
TraesCS7A01G294800.2	Wheat	nucleus	25.0	23.37
TraesCS5A01G258100.1	Wheat	nucleus	31.35	22.6
TraesCS7A01G240800.1	Wheat	nucleus	29.3	21.97
TraesCS2A01G189700.1	Wheat	nucleus	26.64	21.24
TraesCS2A01G330500.1	Wheat	nucleus	29.92	19.86

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF18	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS4A01G162500	EnsemblPlants:TraesCS4A01G162500.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:357677886..357694037

Molecular Weight (calculated)

51773.7 Da

IEP (calculated)

7.456

GRAVY (calculated)

-0.630

Length

488 amino acids

Sequence
(BLAST)

001: MAAHEASAGG GEGARCTPPR PALSLPPRSA VESFFASGAT AASFAETSPG PFTLAAALFP DMPSSAFHGS FTQLLAGAMG SPAAPPSPPS PFAVPPGLSP
101: TALLGPPSLF SPTANFEMSH QQALAQVTAQ AVHSQYTVGS QADYSLPFSS ATTSALTSQF INSSANVTSM KETATLPLHT VNDNLKSNEV SQGFQTSALT
201: VDKPADDGYN WRKYGQKAVK GGEYPRSYYK CTQASCPVKK KVEHSAYGQI TQIIYRGQHN HQRPPKRRSK DGGNLLNEDD FPENRDALTR SEPGSQDHSG
301: KVEVSNDGIT GPSVSKRRGG GDQSSGSSDT EEDNDEAGDD NGDAGIVNAN KRHVPAPAQR IIVQTTSEID LLDDGYRWRK YGQKVVKGNP HPRSYYKCTY
401: QGCDVKKHIE RCSQDPTAVI TTYEGKHSHD VPAARSSVAA AASANASSSI SLLHRGQKAA SSSQRVLPRA ALHTSDSSLQ LKEENEIT

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.