Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74281 | Canola | nucleus | 77.22 | 78.94 |
| GSMUA_Achr10P... | Banana | nucleus | 44.03 | 43.84 |
| GSMUA_Achr4P14270_001 | Banana | nucleus | 41.87 | 42.7 |
| AT2G03340.1 | Thale cress | nucleus | 46.85 | 42.11 |
| VIT_14s0108g01280.t01 | Wine grape | nucleus | 47.94 | 41.94 |
| GSMUA_Achr4P07230_001 | Banana | nucleus | 42.52 | 41.7 |
| GSMUA_Achr7P26450_001 | Banana | nucleus | 43.17 | 41.63 |
| AT1G13960.1 | Thale cress | nucleus | 45.99 | 41.25 |
| KRH44949 | Soybean | nucleus | 46.64 | 41.11 |
| KRH01236 | Soybean | nucleus | 46.2 | 40.96 |
| GSMUA_Achr6P16760_001 | Banana | nucleus | 42.73 | 40.87 |
| GSMUA_Achr7P00610_001 | Banana | nucleus | 42.52 | 40.66 |
| EES16036 | Sorghum | nucleus | 42.52 | 39.52 |
| EER94675 | Sorghum | nucleus | 42.08 | 38.96 |
| AT5G07100.1 | Thale cress | nucleus | 26.03 | 38.84 |
| TraesCS4B01G165900.2 | Wheat | nucleus | 41.0 | 38.81 |
| TraesCS4D01G151700.1 | Wheat | nucleus | 40.78 | 38.76 |
| Zm00001d035323_P001 | Maize | nucleus | 41.65 | 38.71 |
| Zm00001d041740_P001 | Maize | nucleus | 41.43 | 38.66 |
| TraesCS4A01G162500.1 | Wheat | nucleus | 40.78 | 38.52 |
| Zm00001d047309_P001 | Maize | nucleus | 41.43 | 38.43 |
| HORVU5Hr1G028340.1 | Barley | nucleus | 40.78 | 38.21 |
| TraesCS5A01G104900.1 | Wheat | nucleus | 40.78 | 37.83 |
| TraesCS5D01G116100.1 | Wheat | nucleus | 40.78 | 37.83 |
| TraesCS5B01G108500.1 | Wheat | nucleus | 40.56 | 37.78 |
| Os12t0507300-00 | Rice | nucleus | 32.54 | 37.59 |
| PGSC0003DMT400003637 | Potato | nucleus | 35.79 | 36.59 |
| Solyc02g088340.2.1 | Tomato | nucleus | 36.44 | 36.52 |
| PGSC0003DMT400014220 | Potato | nucleus | 38.83 | 34.69 |
| Solyc03g104810.2.1 | Tomato | nucleus | 36.23 | 34.36 |
| Os07t0596900-00 | Rice | nucleus | 32.1 | 34.26 |
| HORVU4Hr1G048400.1 | Barley | mitochondrion | 39.26 | 34.22 |
| Os03t0444900-00 | Rice | endoplasmic reticulum, golgi | 26.03 | 32.17 |
| AT2G30250.1 | Thale cress | nucleus | 26.9 | 31.55 |
| Zm00001d029564_P001 | Maize | nucleus | 24.73 | 30.24 |
| TraesCS2B01G209200.1 | Wheat | nucleus | 29.72 | 29.27 |
| TraesCS2D01G190500.1 | Wheat | nucleus | 29.07 | 29.26 |
| TraesCS2A01G182700.1 | Wheat | nucleus | 29.28 | 29.03 |
| HORVU2Hr1G034420.2 | Barley | nucleus | 27.77 | 28.57 |
| AT2G37260.1 | Thale cress | nucleus | 26.25 | 28.21 |
| AT2G38470.1 | Thale cress | nucleus, plastid | 31.45 | 27.94 |
| AT4G26640.2 | Thale cress | nucleus | 32.1 | 26.57 |
| AT4G26440.1 | Thale cress | nucleus | 32.54 | 26.41 |
| AT5G56270.1 | Thale cress | nucleus | 35.57 | 23.87 |
| AT2G04880.1 | Thale cress | nucleus | 23.21 | 21.97 |
| AT4G30935.1 | Thale cress | nucleus | 20.82 | 20.6 |
| AT1G55600.1 | Thale cress | nucleus | 18.0 | 17.11 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:821213 | UniProt:A0A1I9LLS8 | ProteinID:ANM63536.1 | ArrayExpress:AT3G01080 |
| EnsemblPlantsGene:AT3G01080 | RefSeq:AT3G01080 | TAIR:AT3G01080 | RefSeq:AT3G01080-TAIR-G | EnsemblPlants:AT3G01080.2 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| RefSeq:NP_001325618.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000016D8C9 | Symbol:WRKY58 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
WRKY58WRKY DNA-binding protein 58 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLS8]
Coordinates
chr3:+:25355..27712
Molecular Weight (calculated)
50681.9 Da
IEP (calculated)
8.450
GRAVY (calculated)
-0.857
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEDDVSLI RTTTLVAPTR PTITVPHRPP AIETAAYFFG GGDGLSLSPG PLSFVSSLFV DNFPDVLTPD NQRTTSFTQL LNGTMSVSPG GGGRSTAGMF
101: AGGGPMFTIP SGFSPSSLLT SPMFFPPQSS AHTGFIQPRQ QSQPQPQRPD TFPHHMPPST SVAVHGRQSL DVSQVDQRAR NHYNNPGNNN NNRSYNVVNV
201: DKPADDGYNW RKYGQKPIKG CEYPRSYYKC THVNCPVKKK VERSSDGQIT QIIYKGQHDH ERPQNRRGGG GRDSTEVGGA GQMMESSDDS GYRKDHDDDD
301: DDDEDDEDLP ASKIRRIDGV STTHRTVTEP KIIVQTKSEV DLLDDGYRWR KYGQKVVKGN PHPRSYYKCT TPNCTVRKHV ERASTDAKAV ITTYEGKHNH
401: DVPAARNGTA AATAAAVGPS DHHRMRSMSG NNMQQHMSFG NNNNTGQSPV LLRLKEEKIT I
101: AGGGPMFTIP SGFSPSSLLT SPMFFPPQSS AHTGFIQPRQ QSQPQPQRPD TFPHHMPPST SVAVHGRQSL DVSQVDQRAR NHYNNPGNNN NNRSYNVVNV
201: DKPADDGYNW RKYGQKPIKG CEYPRSYYKC THVNCPVKKK VERSSDGQIT QIIYKGQHDH ERPQNRRGGG GRDSTEVGGA GQMMESSDDS GYRKDHDDDD
301: DDDEDDEDLP ASKIRRIDGV STTHRTVTEP KIIVQTKSEV DLLDDGYRWR KYGQKVVKGN PHPRSYYKCT TPNCTVRKHV ERASTDAKAV ITTYEGKHNH
401: DVPAARNGTA AATAAAVGPS DHHRMRSMSG NNMQQHMSFG NNNNTGQSPV LLRLKEEKIT I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.