Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62213 | Canola | nucleus | 78.4 | 86.85 |
| CDY36419 | Canola | nucleus | 76.26 | 86.15 |
| CDX98138 | Canola | nucleus | 76.46 | 86.0 |
| Bra026869.1-P | Field mustard | nucleus | 79.96 | 85.62 |
| CDX96873 | Canola | nucleus | 77.63 | 85.62 |
| Bra016716.1-P | Field mustard | nucleus | 77.43 | 85.59 |
| CDY33788 | Canola | nucleus | 73.35 | 85.29 |
| CDY16122 | Canola | nucleus | 74.12 | 85.04 |
| Bra019697.1-P | Field mustard | nucleus | 81.13 | 84.58 |
| AT2G03340.1 | Thale cress | nucleus | 70.23 | 70.37 |
| KRH70820 | Soybean | nucleus, plastid | 41.83 | 59.07 |
| VIT_01s0011g00220.t01 | Wine grape | nucleus | 57.39 | 58.76 |
| KRH74950 | Soybean | nucleus | 50.78 | 57.36 |
| Solyc05g012770.2.1 | Tomato | nucleus | 55.06 | 55.71 |
| PGSC0003DMT400072836 | Potato | nucleus | 54.86 | 55.51 |
| KRG89512 | Soybean | nucleus | 45.33 | 53.08 |
| KRH50544 | Soybean | nucleus | 44.36 | 51.58 |
| AT3G01080.2 | Thale cress | nucleus | 41.25 | 45.99 |
| AT5G07100.1 | Thale cress | nucleus | 27.43 | 45.63 |
| AT2G30250.1 | Thale cress | nucleus | 27.04 | 35.37 |
| AT2G38470.1 | Thale cress | nucleus, plastid | 31.91 | 31.6 |
| AT2G37260.1 | Thale cress | nucleus | 25.49 | 30.54 |
| AT4G26640.2 | Thale cress | nucleus | 32.3 | 29.8 |
| AT4G26440.1 | Thale cress | nucleus | 29.96 | 27.11 |
| AT5G56270.1 | Thale cress | nucleus | 33.66 | 25.18 |
| AT4G30935.1 | Thale cress | nucleus | 20.82 | 22.96 |
| AT2G04880.1 | Thale cress | nucleus | 20.23 | 21.36 |
| AT1G55600.1 | Thale cress | nucleus | 19.26 | 20.41 |
Protein Annotations
| MapMan:15.5.22 | PDB:1WJ2 | Gene3D:2.20.25.80 | PDB:2LEX | EntrezGene:837956 | ProteinID:AAD39282.1 |
| ProteinID:AAF79402.1 | ProteinID:AEE29089.1 | EMBL:AF224703 | EMBL:AF425835 | ArrayExpress:AT1G13960 | EnsemblPlantsGene:AT1G13960 |
| RefSeq:AT1G13960 | TAIR:AT1G13960 | RefSeq:AT1G13960-TAIR-G | EnsemblPlants:AT1G13960.1 | TAIR:AT1G13960.1 | EMBL:AY045676 |
| EMBL:BT002629 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009751 | GO:GO:0009753 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0046872 | GO:GO:1900150 | GO:GO:1900425 |
| InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_172849.1 | PFAM:PF03106 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF84 | UniProt:Q9XI90 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000000BD8B | Symbol:WRKY4 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
Coordinates
chr1:+:4776283..4779420
Molecular Weight (calculated)
55818.5 Da
IEP (calculated)
8.297
GRAVY (calculated)
-0.880
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.