Factsheet for AT5G56270.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028939.1-P	Field mustard	nucleus	55.75	85.3
CDY49388	Canola	nucleus	83.11	85.1
Bra002828.1-P	Field mustard	nucleus	83.11	84.84
CDY36788	Canola	nucleus	76.56	84.29
CDY32799	Canola	nucleus	73.65	84.19
CDY11947	Canola	nucleus	69.72	83.45
AT5G07100.1	Thale cress	nucleus	21.54	47.9
GSMUA_Achr5P23900_001	Banana	nucleus	39.3	47.79
GSMUA_Achr4P01600_001	Banana	nucleus	44.4	45.8
GSMUA_Achr6P03500_001	Banana	nucleus	33.92	45.24
GSMUA_Achr5P04150_001	Banana	nucleus	41.34	44.87
AT4G26440.1	Thale cress	nucleus	36.68	44.37
GSMUA_Achr11P...	Banana	nucleus	40.76	43.28
HORVU5Hr1G072020.1	Barley	nucleus	42.36	43.05
TraesCS5D01G266300.1	Wheat	nucleus	41.63	42.18
TraesCS5A01G258100.1	Wheat	nucleus	41.34	41.95
TraesCS5B01G257300.1	Wheat	nucleus	41.34	41.83
KXG35872	Sorghum	nucleus	34.21	40.31
Zm00001d020881_P002	Maize	nucleus	34.21	39.9
Os08t0499300-01	Rice	nucleus	39.01	39.76
HORVU0Hr1G004890.10	Barley	nucleus	34.79	39.7
HORVU7Hr1G049130.1	Barley	nucleus, plastid	13.68	38.37
Zm00001d006001_P006	Maize	nucleus	31.88	38.15
AT2G30250.1	Thale cress	nucleus	21.69	37.91
VIT_19s0015g01870.t01	Wine grape	nucleus	41.05	37.8
Os09t0481700-01	Rice	nucleus	34.79	37.76
OQU80981	Sorghum	nucleus	37.12	37.23
TraesCS7D01G239800.2	Wheat	nucleus	33.92	37.1
TraesCS2A01G330500.1	Wheat	nucleus	39.59	37.01
Zm00001d025669_P001	Maize	nucleus	35.66	36.95
TraesCS7B01G136400.2	Wheat	nucleus, plastid	33.92	36.81
TraesCS2B01G351600.1	Wheat	nucleus	39.01	36.71
TraesCS2D01G332300.1	Wheat	nucleus	39.16	36.6
PGSC0003DMT400056952	Potato	nucleus	39.45	36.23
AT2G38470.1	Thale cress	nucleus, plastid	27.22	36.03
Solyc07g066220.2.1	Tomato	nucleus	38.72	35.99
Zm00001d003331_P001	Maize	nucleus	36.83	35.99
KRH62550	Soybean	nucleus	39.74	35.87
TraesCS7A01G240800.1	Wheat	nucleus	33.92	35.79
AT3G01080.2	Thale cress	nucleus	23.87	35.57
Zm00001d052847_P001	Maize	nucleus	37.7	35.53
KXG26525	Sorghum	nucleus	37.99	35.27
AT2G03340.1	Thale cress	nucleus	26.06	34.89
KRH56379	Soybean	nucleus	39.3	34.79
AT1G13960.1	Thale cress	nucleus	25.18	33.66
AT4G26640.2	Thale cress	nucleus	25.47	31.42
AT2G37260.1	Thale cress	nucleus	18.34	29.37
AT1G55600.1	Thale cress	nucleus	19.07	27.01
Os04t0471700-00	Rice	nucleus	37.55	25.85
AT2G04880.1	Thale cress	nucleus	16.74	23.61
AT4G30935.1	Thale cress	nucleus	14.7	21.67

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:835726	UniProt:A0A178US56	ProteinID:AED96743.1	EMBL:AF418308
ArrayExpress:AT5G56270	EnsemblPlantsGene:AT5G56270	RefSeq:AT5G56270	TAIR:AT5G56270	RefSeq:AT5G56270-TAIR-G	EnsemblPlants:AT5G56270.1
TAIR:AT5G56270.1	EMBL:AY096493	EMBL:AY123006	Unigene:At.21527	ProteinID:BAB08871.1	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555
GO:GO:0009790	GO:GO:0009791	GO:GO:0009942	GO:GO:0009987	GO:GO:0030010	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	RefSeq:NP_200438.1	ProteinID:OAO95974.1	PFAM:PF03106	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	UniProt:Q9FG77	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI00000017B9	Symbol:WRKY2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]

Coordinates

chr5:+:22779614..22783426

Molecular Weight (calculated)

74565.3 Da

IEP (calculated)

5.984

GRAVY (calculated)

-0.891

Length

687 amino acids

Sequence
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.