Factsheet for Os04t0471700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0285800-01
Os06t0154500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	Os06t0154500-01	AT2G43790.1	24830428
AT4G26440.1	Os03t0285800-01	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G004890.10	Barley	nucleus	33.87	56.15
Zm00001d025669_P001	Maize	nucleus	37.07	55.81
TraesCS2A01G330500.1	Wheat	nucleus	40.98	55.65
TraesCS2D01G332300.1	Wheat	nucleus	40.38	54.83
TraesCS2B01G351600.1	Wheat	nucleus	39.98	54.66
Zm00001d003331_P001	Maize	nucleus	36.87	52.35
KXG26525	Sorghum	nucleus	38.38	51.76
GSMUA_Achr6P03500_001	Banana	nucleus	24.15	46.8
GSMUA_Achr5P23900_001	Banana	nucleus	25.25	44.6
Bra028939.1-P	Field mustard	nucleus	19.94	44.32
GSMUA_Achr4P01600_001	Banana	nucleus	28.46	42.64
GSMUA_Achr5P04150_001	Banana	nucleus	26.65	42.02
GSMUA_Achr11P...	Banana	nucleus	26.55	40.96
CDY11947	Canola	nucleus	23.25	40.42
CDY36788	Canola	nucleus	24.85	39.74
Os09t0481700-01	Rice	nucleus	24.95	39.34
Os08t0499300-01	Rice	nucleus	26.45	39.17
Os05t0343400-01	Rice	nucleus	18.84	38.6
CDX94335	Canola	nucleus	19.84	38.52
Bra026438.1-P	Field mustard	nucleus	20.44	38.2
CDX89336	Canola	nucleus	20.34	38.02
CDY69527	Canola	nucleus	20.64	37.94
Bra019105.1-P	Field mustard	nucleus	19.94	37.62
CDY49388	Canola	nucleus	25.25	37.56
AT5G56270.1	Thale cress	nucleus	25.85	37.55
Bra002828.1-P	Field mustard	nucleus	25.25	37.44
CDY42736	Canola	nucleus	19.84	37.43
AT4G26440.1	Thale cress	nucleus	20.34	35.74
CDY32799	Canola	nucleus	20.54	34.11
Os12t0507300-00	Rice	nucleus	13.43	33.58
Os01t0826400-01	Rice	extracellular	18.04	32.43
Os03t0758950-01	Rice	nucleus, plastid	13.93	31.66
VIT_19s0015g01870.t01	Wine grape	nucleus	23.65	31.64
KRH62550	Soybean	nucleus	23.75	31.14
Os07t0596900-00	Rice	nucleus	13.23	30.56
KRH56379	Soybean	nucleus	23.45	30.15
Os07t0583700-01	Rice	nucleus	18.64	30.1
Os05t0474800-01	Rice	nucleus	16.53	28.85
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	10.32	27.61
PGSC0003DMT400029328	Potato	nucleus	17.74	25.39
Solyc10g005680.1.1	Tomato	nucleus	17.03	24.18
Os08t0276200-01	Rice	cytosol, nucleus, plastid	7.11	19.4
Os03t0758900-01	Rice	plastid	2.3	5.68

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4336126	EMBL:AY341843	ProteinID:BAF14971.1	ProteinID:BAS89651.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlantsGene:Os04g0471700	EnsemblPlants:Os04t0471700-00	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221
PANTHER:PTHR31221:SF86	UniProt:Q7XAA9	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00001B97B7	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_015634497.1	SEG:seg	:	:	:

Description

WRKY GENE 35Similar to WRKY10 (WRKY transcription factor 35). (Os04t0471700-00)

Coordinates

chr4:-:23579872..23587188

Molecular Weight (calculated)

103641.0 Da

IEP (calculated)

5.980

GRAVY (calculated)

-0.458

Length

998 amino acids

Sequence
(BLAST)

001: MTMTTATLDP PPPPLLIAGS LLDDDRDAGS AASSSPRWLP RARGSTVGSP PRRGGEERGG EAATRRKGNS SCPDDDDDCR NDEDDCRNDD DYRDDDVGAT
101: TDGGGDAAAL LPMAMMTATT MAPMPVEAAV DGGGELSSAG EGGQRRVNLL PTKILSAYEN HLFSQALACR EDEWIIEKLA VIAARRSSFV SEESLCSVPA
201: AALVSLAIAH LAFSPMLVYG VLDRLCSVCH LGEMEGDIAM EEWKDSNHRG ADYLMTMPMQ NFLADAFPPP ELLEGEGGFE KHGLSVAVGS PPPTPPPPED
301: GCSPLPLTPQ FGQKFGSGGG GGGSLADRRA RGGFSNVARI SVPYNQPAAD VSSAGAPSPY VTIPPGLSPT TLLESPVFSN AMGQASPTTG KLHMLGGAND
401: SNPIRFESPR IEEGSGAFSF KPLNLASSHY AAEEKTKSLP NNQHQSLPIS VKTEATSIQT AQDEAAANQL MQPQFNGGKR SRAAPDNGGD GEGQPAEGDA
501: KADSSSGAAA VAVVAAAAAA VAEDGYSWRK YGQKQVKHSE YPRSYYKCTH ASCAVKKKVE RSHEGHVTEI IYKGTHNHPK PAASRRPPVH PPPPSPATTT
601: TTPLPPGDAQ ADHAPDGGGG STPVGAGQAG AEWHNGGVVG GEGLVDATSS PSVPGELCES TASMQVHEGA AAAQLGESPE GVDVTSAVSD EVDRDDKATH
701: VLPLAAAAAD GESDELERKR RKLDSCATMD MSTASRAVRE PRVVIQTTSE VDILDDGYRW RKYGQKVVKG NPNPRSYYKC THPGCLVRKH VERASHDLKS
801: VITTYEGKHN HEVPAARNSG HPAGSASPGG GAGSSSQPHG VGVGGRRPEV PSVQESLMRL GGGCGAAPFP PHFGLHLPPP PPRDPLAPMS NFPYSLGHAP
901: SPALRGLPPP PPPPPSASAL AVAGLGGVVE GLKYPMLAPP SVHSLLRHRQ GGGMEAVVVP KAEVKQEAMR PAAAVAGAGR GAAVYQQAMS RVSLGNQL

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.