Factsheet for GSMUA_Achr5P04150_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P19320_001
GSMUA_Achr5P06640_001
GSMUA_Achr6P33100_001
GSMUA_Achr9P04280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	GSMUA_Achr10P...	AT2G43790.1	24830428
AT4G26440.1	GSMUA_Achr2P19320_001	AT2G43790.1	24830428
AT4G26440.1	GSMUA_Achr5P06640_001	AT2G43790.1	24830428
AT4G26440.1	GSMUA_Achr6P33100_001	AT3G45640.1	24830428
AT4G26440.1	GSMUA_Achr9P04280_001	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	73.78	72.18
GSMUA_Achr4P01600_001	Banana	nucleus	70.77	67.27
GSMUA_Achr6P03500_001	Banana	nucleus	47.55	58.45
GSMUA_Achr5P23900_001	Banana	nucleus	46.45	52.04
Bra028939.1-P	Field mustard	nucleus	34.12	48.11
CDY11947	Canola	nucleus	41.07	45.3
CDY36788	Canola	nucleus	42.81	43.43
TraesCS5D01G266300.1	Wheat	nucleus	45.5	42.48
TraesCS5B01G257300.1	Wheat	nucleus	45.5	42.42
TraesCS5A01G258100.1	Wheat	nucleus	45.18	42.25
HORVU7Hr1G049130.1	Barley	nucleus, plastid	16.27	42.04
Bra002828.1-P	Field mustard	nucleus	44.55	41.9
HORVU5Hr1G072020.1	Barley	nucleus	44.71	41.86
CDY49388	Canola	nucleus	44.08	41.58
GSMUA_Achr3P09940_001	Banana	nucleus	24.01	41.53
KXG35872	Sorghum	nucleus	38.23	41.51
AT5G56270.1	Thale cress	nucleus	44.87	41.34
Zm00001d006001_P006	Maize	nucleus	36.65	40.42
Zm00001d020881_P002	Maize	nucleus	37.44	40.24
HORVU0Hr1G004890.10	Barley	nucleus	38.07	40.03
Os08t0499300-01	Rice	nucleus	41.39	38.87
Os09t0481700-01	Rice	nucleus	38.7	38.7
CDY32799	Canola	nucleus	36.33	38.27
OQU80981	Sorghum	nucleus	41.39	38.25
TraesCS7D01G239800.2	Wheat	nucleus	37.91	38.22
Bra026438.1-P	Field mustard	nucleus	31.91	37.83
CDX89336	Canola	nucleus	31.91	37.83
TraesCS2A01G330500.1	Wheat	nucleus	43.92	37.82
TraesCS2D01G332300.1	Wheat	nucleus	43.92	37.82
CDY69527	Canola	nucleus	32.39	37.75
CDX94335	Canola	nucleus	30.65	37.74
TraesCS2B01G351600.1	Wheat	nucleus	43.44	37.67
TraesCS7B01G136400.2	Wheat	nucleus, plastid	37.44	37.44
Zm00001d003331_P001	Maize	nucleus	41.55	37.41
CDY42736	Canola	nucleus	31.12	37.24
Bra019105.1-P	Field mustard	nucleus	31.12	37.24
GSMUA_Achr11P...	Banana	nucleus	27.17	36.91
GSMUA_Achr6P32720_001	Banana	nucleus	26.54	36.84
Zm00001d025669_P001	Maize	nucleus	38.39	36.65
TraesCS7A01G240800.1	Wheat	nucleus	37.44	36.41
AT4G26440.1	Thale cress	nucleus	32.54	36.27
GSMUA_Achr4P14270_001	Banana	nucleus	25.59	35.84
GSMUA_Achr7P25840_001	Banana	nucleus	13.74	35.22
Zm00001d052847_P001	Maize	nucleus	40.44	35.12
KXG26525	Sorghum	nucleus	40.92	35.0
GSMUA_Achr4P07230_001	Banana	nucleus	25.28	34.04
GSMUA_Achr4P13970_001	Banana	nucleus	27.49	33.92
GSMUA_Achr10P...	Banana	nucleus	24.64	33.69
GSMUA_Achr7P00610_001	Banana	nucleus	25.59	33.61
GSMUA_Achr6P16760_001	Banana	nucleus	25.28	33.2
VIT_19s0015g01870.t01	Wine grape	nucleus	39.02	33.11
GSMUA_Achr7P26450_001	Banana	nucleus	24.64	32.64
PGSC0003DMT400056952	Potato	nucleus	37.6	31.82
Solyc07g066220.2.1	Tomato	nucleus	36.97	31.66
GSMUA_Achr8P01790_001	Banana	nucleus	28.44	31.58
KRH62550	Soybean	nucleus	37.91	31.54
KRH56379	Soybean	nucleus	37.44	30.54
GSMUA_Achr1P17160_001	Banana	nucleus	19.12	29.44
GSMUA_Achr3P29850_001	Banana	nucleus	26.54	29.17
GSMUA_AchrUn_...	Banana	nucleus	19.91	27.51
GSMUA_Achr4P16840_001	Banana	nucleus	18.17	27.32
Os04t0471700-00	Rice	nucleus	42.02	26.65
GSMUA_Achr10P...	Banana	nucleus	18.48	24.74
GSMUA_Achr9P19580_001	Banana	nucleus	19.12	21.68

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr5G04150_001	EnsemblPlants:GSMUA_Achr5P04150_001	EnsemblPlants:GSMUA_Achr5T04150_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0SVJ4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002965FD7	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Probable WRKY transcription factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G04150_001]

Coordinates

chr5:+:2974507..2980296

Molecular Weight (calculated)

68604.9 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.712

Length

633 amino acids

Sequence
(BLAST)

001: MAGTDDDSSV IEFWSPSNRS SRTLPPSLSN EAFGSSSFSD FLAENGNGNV GPLWKSETQR MGTNTNIEGN EAGVSDSNGF SLQPRLFGSS TPGGLAERMA
101: TRKGFQVPKL DTACIPPAGM ASQSDVGLPY LTIPPGLSPT MLLESPVFLS DPMVQLFSTT GKFKSAEDDA SNSMLVSNSA ASTKSEDYLF EDNLEAFAFK
201: PPPESHSHLS TSGKKPQELP GMEVSTQPEK PTQAGMASHH SPAVDDQHDG EGDLRGELSA AAGTPAEDGY NWRKYGQKQV KGCEYPRSYY KCTQPNCQVK
301: KKVERSHEGH ITEIIYKGAH NHPKPHLNRR PGSSQSGNGG QDWLNQDGTR LSSDVIGVSS TMSNDEEDDD RATHGSVSLG CDGEGDETES KRRKIDACAI
401: EMSAASRAVR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTNPGCIVRK HIERASHDLK SVITTYEGKH NHDVPVARSS SHPNSAPSSN
501: PNSDPQPHSL LQRSEPTQDN FVRFDGHAPL GTFRFPGREQ LGPATSCFPF ALGQPGLTNL AMAGLGPMAA MKMPVIPPVH PYLGRHHPAE AGYMMHKIEP
601: KEESAPDSVL PVPPNATSVY HQMMSRLPLG PHL

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.